Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 553 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score = 78.2 bits (191), Expect = 7e-19
 Identities = 90/408 (22%), Positives = 170/408 (41%), Gaps = 45/408 (11%)

Query: 38  LWFAFAMFLLGGSFAMVIRAELFQPGLQIVQPAFFNQMTTMHGLIMVFGAVMPAFVGLAN 97
           L++    FL+G    +VI  ++  P L +     F +M  +H   ++F     A +  + 
Sbjct: 84  LFWGVVGFLVG----VVIATQMVVPTLNLEPWFSFGRMRPLHTSAVIFAFGGNALIATSF 139

Query: 98  WMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGGGPNFGWTFYAPLSTTYAPE 157
           +++     A  +A P +  F FW     F++L +T          G+      S  YA  
Sbjct: 140 YVVQRTCRAR-LAFPALARFVFWGYQF-FIVLAAT----------GYLMGVTASREYAEP 187

Query: 158 SVTFFIFAIHLMGISSIMGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLL-IAVMP 216
                ++    + I  +   +  V T+L    P        ++V  W   +F++ IA++ 
Sbjct: 188 EWYVDLW----LTIVWVAYFVVFVGTLLRRTEPH-------IYVANWFYLSFIITIAMLH 236

Query: 217 VLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSS-IIP 275
           ++        +   FG+  +SA  G    L Q   W++GH  V   +   F A+    +P
Sbjct: 237 IVNNLAVPASL---FGSKSYSAFAGVQDALTQ---WWYGHNAVGFFLTAGFLAMMYYFVP 290

Query: 276 TFSRKPLFGYTSMVYATASIAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKV 335
             + +P++ Y   +    S+ FL      HH+    +P   +   M  ++++ +P+   +
Sbjct: 291 KQAERPIYSYRLSIIHFWSLIFLYIWAGPHHLHYTALPDWAQTLGMVFSVVLWMPSWGGM 350

Query: 336 FNWVSTM---WQGSLT--FETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVA 390
            N + T+   W    T      M+FA+AF   + +  F G ML+I   +   H T + + 
Sbjct: 351 INGLMTLNGAWDKIRTDPIIRMMVFALAF---YGMATFEGPMLSIKAVNSLSHYTEWTIG 407

Query: 391 HFHYVLVPGAIFGIFASAYYWLPKWTG--HMYDETLGKLHFWLSFVGM 436
           H H   +       FA+ YY +P+  G   +Y   +   HFWL+ +G+
Sbjct: 408 HVHSGALGWNGMITFAALYYLVPRLWGRERLYSLRMVNWHFWLATLGL 455



 Score = 25.4 bits (54), Expect = 0.006
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 98  WMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPG 137
           +++P + G   +   RM N+ FWL     +L  + L+  G
Sbjct: 427 YLVPRLWGRERLYSLRMVNWHFWLATLGLVLYAAALWVAG 466