Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 667 a.a., cytochrome O ubiquinol oxidase subunit I from Agrobacterium fabrum C58

 Score =  411 bits (1057), Expect = e-119
 Identities = 204/518 (39%), Positives = 315/518 (60%), Gaps = 21/518 (4%)

Query: 24  WVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRAE--LFQPGLQ-IVQPAFFNQMTTMHG 80
           W  + +HK IG +Y+  A  M L G + A+++R +  +   G +  + P  ++Q+ T HG
Sbjct: 58  WFTSIDHKKIGIMYIILALVMLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHG 117

Query: 81  LIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGGGP 140
           +IM+F   MP   GL N+++PL IGA D++ P +NNFSFW+  A  ++ + +LF  G   
Sbjct: 118 VIMIFFMAMPMITGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFV-GEYA 176

Query: 141 NFGWTFYAPLSTTYAPESV--TFFIFAIHLMGISSIMGAINVVATILNLRAPGMTLMKMP 198
             GW  Y PLS       V   ++I+ + + G+ + +  IN++ TI+ +RAPGMT+M+MP
Sbjct: 177 QTGWLAYPPLSGIDGSPGVGVDYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMP 236

Query: 199 LFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 258
           +FVWT L +  L++A  P+L   + ++ +D + GT+FF+   GG+P+++ ++ W +GHPE
Sbjct: 237 IFVWTSLCSNILIVASFPILTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPE 296

Query: 259 VYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAFLSFIVWAHHMFVVGIPLVGEL 318
           VYI++LPAFG  S I+ TFS K LFGY SMVYATA I  LS++VW HH F +G       
Sbjct: 297 VYILVLPAFGIFSEIVATFSGKRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNA 356

Query: 319 FFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPA 378
           FF   T++I++PTG K+FNW+ TM++G + F+ PML+ + F+I F IGG +G++LA+ PA
Sbjct: 357 FFGITTMIISIPTGAKIFNWLFTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPA 416

Query: 379 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 438
           DF  H++ F++AHFH  ++ G +FG+ A   YW PK  G+  D   GKL FW  F+G   
Sbjct: 417 DFVLHNSLFLIAHFHNTIIGGVVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYF 476

Query: 439 AFFPMHFVGLAGMPRRV---PDYNLQFADFNMVSSVGAFMFG------ATQIFFLFIVIK 489
           AF P++ +GL G+ RR+    D +LQ   + ++++ GAF+          Q+   F+   
Sbjct: 477 AFMPLYILGLMGITRRISQFEDNSLQI--WFVIAAFGAFLIALGIASFIIQLIVSFLKRD 534

Query: 490 CIRGGTPAPAKPWDGAEGLEWSIPSPAPYHTFTTPPEV 527
            +R  T  P      A  LEWS  SP P + F   P +
Sbjct: 535 QLRDVTGDPY----NARTLEWSTSSPPPQYNFAFTPVI 568