Pairwise Alignments

Query, 763 a.a., penicillin-binding protein 1C from Pseudomonas simiae WCS417

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  157 bits (396), Expect = 3e-42
 Identities = 173/588 (29%), Positives = 247/588 (42%), Gaps = 66/588 (11%)

Query: 47  RYPVQTHEVSPYYLDALLTYEDRWFYQHPGVNPLALARATWQNLTGARVVSGGSTLSMQ- 105
           R  ++  +V PY L+ L+  EDR FY H GV+P ++ARA W N +G ++  GGSTL+ Q 
Sbjct: 168 RILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQL 227

Query: 106 VARLLDPHSRTFHGKLRQLWRTAQLEWHLSKAEILNLYLNRAPFG----GTLQGVAAASW 161
           V      + R+   KL +      LE H SK EIL  YLN    G      + G   AS 
Sbjct: 228 VKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQ 287

Query: 162 AYLGKSPSQLTHAEAALLAVLPQAPSRLRPDRHPQRAQEARDKVLRRLAEFQVWPQSAVD 221
            + G+  S+L   + ALL  + + PS   P R+P+RA E R+ VL  L +  V     V 
Sbjct: 288 FFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVA 347

Query: 222 EALEEPL------LLAPRLEPSLAPLLARRLNR-------PDSPPLIRTTLDATLQRRLE 268
            A + PL       LA    P    L+ R+L          +    I T+ D  LQ + E
Sbjct: 348 AAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 407

Query: 269 DLLLGWRARL-----PEHTSAAILVVEEESMAVRAYLGSVDINDAKRFGHVDMISALRSP 323
             +     RL      +   AA++V   E+  V+A +GS     A   G    + A+R  
Sbjct: 408 ASVNDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGS---RQASFAGFNRALDAVRPI 464

Query: 324 GSTLKPFLYGMALDDGLIHS-ESLLQDVPR--RYGD---YRPGNFSMGFTGAVPASTALS 377
           GS +KP +Y  AL+    ++  S L D P   + GD   + P NF     G V     ++
Sbjct: 465 GSLVKPAVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIA 524

Query: 378 SSLNLPAVQL-LEAYGPKRFAAEMRIGGVPLALPALAEPNLALILGGAGSRLEDLVSGYS 436
            S N+   +L LE   P       R+ GV    PA      +++LG       ++ + Y 
Sbjct: 525 HSYNISTSRLGLEVGVPNVLKTIARL-GVTREFPAFP----SILLGAGAMTPMEVATMYQ 579

Query: 437 AFARDGKSATLR-LQPDDTLRERPL----------LSPGSAWIVRRILSGQAR--PDRDP 483
             A  G +  +R ++   T    PL             GS ++++  +    R    R  
Sbjct: 580 TLANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSV 639

Query: 484 RAELVQRPVLAWKTGTSYGFRDAWAIGVGPRYLIGVWIGRPDG--TPVPGQFGLASAAPL 541
            + L     LA KTGTS   RD+W  G G   L  VW+GR D   TP  G  G       
Sbjct: 640 YSVLPANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTS 699

Query: 542 MLQVHDVLTNRDSQRGISAPVKPVPANVGVAAICWPLGQPMSRSDPNC 589
            ++  D L              P P N+  A I    GQ    SD NC
Sbjct: 700 FMRKADPLPLN----------MPQPDNIVQAWIDPHTGQ---GSDANC 734