Pairwise Alignments

Query, 763 a.a., penicillin-binding protein 1C from Pseudomonas simiae WCS417

Subject, 820 a.a., peptidase from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 2e-32
 Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 1/183 (0%)

Query: 47  RYPVQTHEVSPYYLDALLTYEDRWFYQHPGVNPLALARATWQNLTGARVVSGGSTLSMQV 106
           R P++  ++ P ++ ALL+ ED  F  H GV+P +L RA  Q +    + SGGST++MQV
Sbjct: 67  RTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITMQV 126

Query: 107 AR-LLDPHSRTFHGKLRQLWRTAQLEWHLSKAEILNLYLNRAPFGGTLQGVAAASWAYLG 165
           A+       R+F  K  ++    Q+E  L+K EIL LY+N+   G    G+ AAS  Y G
Sbjct: 127 AKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAASQVYYG 186

Query: 166 KSPSQLTHAEAALLAVLPQAPSRLRPDRHPQRAQEARDKVLRRLAEFQVWPQSAVDEALE 225
           KS    + A+ A++A LP+APSR  P  +P R++E RD +L R+ +     Q+A + A+ 
Sbjct: 187 KSIRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDQAAYESAIA 246

Query: 226 EPL 228
           EPL
Sbjct: 247 EPL 249



 Score = 69.7 bits (169), Expect = 6e-16
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 18/187 (9%)

Query: 263 LQRRLEDLLLGWRARLPEHTSAAILVVEEESMAVRAYLGSVDINDAKRFGHVDMISALRS 322
           +QR+ +D L   +  L +    A++ ++ ++ A+RA +G      +    +     A R 
Sbjct: 405 VQRQKDDSLKFSQVPLAQ---GALVSLDPQNGAIRALVGGFAFEQSN---YNRATQAKRQ 458

Query: 323 PGSTLKPFLYGMALDDGLIHSESLLQDVPRRYGD------YRPGNFSMGFTGAVPASTAL 376
           PGS+ KPF+Y  ALD+G   + SL+ D P  + D      +RP N +  F G +    AL
Sbjct: 459 PGSSFKPFIYSAALDNGYT-AASLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREAL 517

Query: 377 SSSLNLPAVQLLEAYGPKRFAAEM-RIGGVPLALPALAEPNLALILGGAGSRLEDLVSGY 435
             S NL +++LL+A G  +    M R G     LP    PNL+L LG A     ++ +G+
Sbjct: 518 YKSRNLVSIRLLQAMGVGKTIDYMTRFGFSKSDLP----PNLSLALGTATLTPMEIATGW 573

Query: 436 SAFARDG 442
           S FA  G
Sbjct: 574 STFANGG 580



 Score = 39.3 bits (90), Expect = 8e-07
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 11/147 (7%)

Query: 465 SAWIVRRILSGQARPDRDPRAELVQRPVLAWKTGTSYGFRDAWAIGVGPRYLIGVWIG-- 522
           + +I+  IL    +     RA  + RP +A KTGT+   +DAW  G    Y+  VW G  
Sbjct: 662 TTYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTNESKDAWFSGYNADYVTTVWTGYD 721

Query: 523 RPDGTPVPGQFGLASAAPLMLQVHDVLTNRDSQRGISAPVKPVPANVGVAAICWPLGQPM 582
           +P+      +FG   A P+ +          + +      +P P  +    I    G+  
Sbjct: 722 QPESLG-RREFGGTVALPIWMSYMGA-----ALKDKPPHTQPEPEGILSLRIDPVSGRAA 775

Query: 583 SRSDPNCRRQRFAWTLDNTTPPTLQAL 609
           S S PN   + F       TPP++  L
Sbjct: 776 SPSTPNAYFELFK---SEDTPPSVNEL 799