Pairwise Alignments

Query, 375 a.a., cytochrome B559 subunit alpha from Pseudomonas simiae WCS417

Subject, 294 a.a., Cytochrome c oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  181 bits (459), Expect = 2e-50
 Identities = 92/248 (37%), Positives = 144/248 (58%), Gaps = 8/248 (3%)

Query: 22  AAWTTNMAPGATEVSHAVFDLHMTIFWICVVIGIIVFGAMFWSMILHR--RSTGQVAAKF 79
           A W  N+   AT V   +   H  +  I ++  I++F  +   +++ R       V +K 
Sbjct: 39  APWQINLQDAATPVMENIH--HFNVLLITIITAIVLFVLVLLVIVVVRFNERANPVPSKT 96

Query: 80  HESTTVEILWTVVPLLILIAMAIPATKTLINIYDSSESDIDIQVTGYQWKWHYKYLGQDV 139
             +T +E+ WTVVP+LIL+A+AIP+ + L    +  + D+ ++VTG+QW W Y+Y     
Sbjct: 97  SHNTLIEVAWTVVPVLILVAIAIPSFRLLHLELNIPKPDLTVKVTGHQWYWSYEYPDNGG 156

Query: 140 EFFSNLATPAEQIHNQATKGEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVK 199
             F +     + +      G+  LL VD  +V+P+   +R  VTAADVIHS+ VP+F VK
Sbjct: 157 FGFDSYLVAEKDLK----PGQPRLLAVDNEVVVPINKNIRIQVTAADVIHSFAVPSFGVK 212

Query: 200 RDAIPGFVNEAWTRVEKPGIYRGQCAELCGKDHGFMPIVVEVKSKADYETWLGERKAEAA 259
            DA+PG +NE+W ++ + G+Y GQC+ELCG+DH FMPI V   S+AD+  W+ + KA+ A
Sbjct: 213 IDAMPGRLNESWFKITREGVYYGQCSELCGRDHAFMPIAVRAVSEADFNAWVAQAKAKFA 272

Query: 260 KLKELTSK 267
             K+   K
Sbjct: 273 SAKDAEGK 280