Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  187 bits (476), Expect = 1e-51
 Identities = 165/602 (27%), Positives = 265/602 (44%), Gaps = 45/602 (7%)

Query: 88  ADLAQNLRPSLVDLDVFSKTALLAAGKLAGDPQALLLQAERELGANLEQLSQYAISVNSP 147
           +D+ Q L  SL  L +     +LA G      +A+    +  L A   Q  +   S  SP
Sbjct: 47  SDITQ-LNASLTKLRIVRLQYMLANGD-----EAVAQNVQTNLDAFAAQQQKLIDSFKSP 100

Query: 148 EAARYLPP----LLAASQHLGKLSLA-----RDKLVTSGRAELAD-DVEREVSNIRSQAD 197
           E  + L      + A  Q L K+  A       + V   +A++A+  +    ++++   D
Sbjct: 101 ENLKLLNEQKSIITAYQQSLNKMREAYRNGNASRQVMGDKADIANAQINALETSVKQMPD 160

Query: 198 LLEQLPLLGVKASAESSAD-------DFSALMGLENTGKTEAQ---------DTGVDLKR 241
             E L      A A+            ++  +  E   +  AQ         D       
Sbjct: 161 SSEHLAQFQAVADAKMQFQLARYEVRGYTGNVSPETEARAAAQIEKAIAGLKDLNATFGA 220

Query: 242 ELNSLLTRYPAELKRTREQIQQR--------TDLAAQTHQKID--TVQHAIAGLEPVVRA 291
              S LT     L   R  +Q          T  A  T Q  D  T+   +  ++   R 
Sbjct: 221 SQQSALTALETALGAYRSAVQNYKAANANIVTARAEMTTQGADIVTISDKLYEIQLTRRD 280

Query: 292 QHGKIQGEVRLMQGVMIGLILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALG 351
                   ++L+  ++  L+ +IA L+ T  R++ R +      +   A GD S  I + 
Sbjct: 281 AESAQARSLQLISTLLALLVGVIAALVIT--RQITRPIQETLAVVERIASGDLSHNIQVT 338

Query: 352 KTNRELHDIEASLNRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTA 411
           + + EL  ++  + R+   L +L+  IR    ++  ++  L+ ++     G   Q  +T 
Sbjct: 339 RRD-ELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETD 397

Query: 412 QIRDSLGELEATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQ 471
           Q+  ++ E+ AT+Q+VA +A QA+ A+  A      G +V+  ++  +  L  EV ++  
Sbjct: 398 QVATAMHEMTATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTD 457

Query: 472 MIEKLAEESATIGGVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQR 531
            +  L +ES  IG V+ VI+++A+QTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQR
Sbjct: 458 AMTHLQQESNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQR 517

Query: 532 TAGATAEIQSLIAGLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISET 591
           T  +T EI+ L+AGLQ+   Q    M       +++ +  + A  +L+ I   +  I   
Sbjct: 518 TQKSTEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSM 577

Query: 592 AVRIADVTAQQSGAVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAF 651
             +IA    QQS    EI  +   +  + E       +       L  LG QL   V  F
Sbjct: 578 NQQIAAAAEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHF 637

Query: 652 RV 653
           RV
Sbjct: 638 RV 639