Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  176 bits (447), Expect = 2e-48
 Identities = 124/353 (35%), Positives = 181/353 (51%), Gaps = 4/353 (1%)

Query: 299 EVRLMQGVMIGLILLIALL--IDTLQRRLARVLTNLAPA-LSTWAEGDFSQPIALGKTNR 355
           E R     +  LIL++A+L     L R L   L  L    L     GD S  + L   + 
Sbjct: 137 EERFANYAVAVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLACKD- 195

Query: 356 ELHDIEASLNRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRD 415
           E+  + ++ N ++A    +V T+   A ++   +  LA   + +  G   Q  +T Q   
Sbjct: 196 EVGQMASAFNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQHGMLGQQSETDQAAT 255

Query: 416 SLGELEATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEK 475
           ++ E+ AT+  +A  A      S++A      GQ V+      +  L   VQQ A MI+K
Sbjct: 256 AINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLSTGVQQTAVMIQK 315

Query: 476 LAEESATIGGVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGA 535
           LAE+S  I GV++VI SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+R   +
Sbjct: 316 LAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSS 375

Query: 536 TAEIQSLIAGLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRI 595
           T EI  +++ LQ+    +V  M+     A+    QAQ A  AL EI GA+  + E+  +I
Sbjct: 376 TDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAEITGAVAQMRESNTQI 435

Query: 596 ADVTAQQSGAVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAV 648
           A    QQS    E+      I  + E+ + +     +    L  L G+L+ A+
Sbjct: 436 AVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLATLAGELSKAI 488



 Score = 25.4 bits (54), Expect = 0.006
 Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 9/218 (4%)

Query: 228 GKTEAQDTGVDLKRELNSLLTRYPAELKRTREQIQQRTDLAAQTHQKIDTVQHAIAGLEP 287
           G+    D       E+ + +         TR+  Q    LA    + +  VQ +IAGL  
Sbjct: 245 GQQSETDQAATAINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLST 304

Query: 288 VVRAQHGKIQGEVRLMQGVMIGLILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQP 347
            V+     IQ      Q +  G++ +I  + +         L  L  A+     G+  + 
Sbjct: 305 GVQQTAVMIQKLAEDSQKIN-GVVSVIHSIAEQTN------LLALNAAIEAARAGEMGRG 357

Query: 348 IALGKTNRELHDIEASLNRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQA 407
            A+     E+ ++   +      +  +V  ++    + V   +  +  +      A+   
Sbjct: 358 FAV--VADEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAG 415

Query: 408 GDTAQIRDSLGELEATIQQVAGDASQAAGASRSAGQAV 445
              A+I  ++ ++  +  Q+A  A Q +  +    +AV
Sbjct: 416 AALAEITGAVAQMRESNTQIAVAAEQQSHVAEEMNRAV 453