Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  187 bits (474), Expect = 2e-51
 Identities = 149/515 (28%), Positives = 244/515 (47%), Gaps = 38/515 (7%)

Query: 171 DKLVTSGRAELADDVEREVSNI-RSQADLLEQLPLLGVKASAESSADDFSALM------- 222
           D+   + R  L    ++ V  I R Q  LL+     G   +    A D SAL+       
Sbjct: 130 DQRREASRDVLGSSADKAVDLIGRVQRSLLQ-----GANINQYQHAVDVSALLQQARFQV 184

Query: 223 -GLENTGKTEAQDTGV----DLKRELNSLLTRYPAELKRT-----------REQIQQ--R 264
            G   +G  + Q T +        EL +L  + PAE   +           R+ + Q   
Sbjct: 185 RGYTYSGNADYQQTALKAIDQALAELRALPAKVPAEHAASLDDAATAMGGYRDAVTQFGN 244

Query: 265 TDLAA-QTHQKIDTVQHAIAGLEPVVRAQHGKIQGEVRLMQGVMIGLILLIALLIDTLQ- 322
             LA+ Q  Q++      +     ++ A   +++         ++ +  ++AL +  L  
Sbjct: 245 AQLASEQALQRMVEQGTVLLQASQMMTASQTEVRDAAAAQAKTLLTVATVLALALGLLAA 304

Query: 323 ----RRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRAYLVDLVGTI 378
               R++   L     A    A GD +Q + + + + EL  ++AS++R+   L +L+G I
Sbjct: 305 WAITRQIIIPLRQTLRAAERVASGDLTQSLQVQRRD-ELGQLQASMHRMTQGLRELIGGI 363

Query: 379 RGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGAS 438
                ++  ++  L+ ++     G   Q  +T Q+  ++ ++ AT+ +VA +A QA+ A+
Sbjct: 364 GDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQVATAMNQMTATVHEVARNAEQASEAA 423

Query: 439 RSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTVIRSIADQTN 498
             A Q   +G RV+G ++  +  L  EV  +++ +  L  ES  IG VL VI+S+A QTN
Sbjct: 424 LMADQQAREGDRVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTN 483

Query: 499 LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIAGLQSAAHQSVQGMR 558
           LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT  +T EI+ LIAGLQS   +    M 
Sbjct: 484 LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSTEEIEELIAGLQSGTQRVASVMD 543

Query: 559 AQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSGAVSEIRDNSERIHQ 618
              +  +++ +  + A  +L+ I   + +I     +IA    +Q+    EI  +   +  
Sbjct: 544 NSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQQIATAAEEQTAVAEEINRSVMNVRD 603

Query: 619 MGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFRV 653
           + +       +  S    L  LG  L   V  FR+
Sbjct: 604 ISDQTSAASEETASSSVELARLGTHLQGLVGRFRL 638



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 53/237 (22%), Positives = 85/237 (35%), Gaps = 41/237 (17%)

Query: 405 RQAGDTAQIRDSLGELEATIQQVAGDASQAAGASR-------------------SAGQAV 445
           R     A++  +L  L+  +Q + G   Q A   R                    A Q  
Sbjct: 74  RDDASLAELEKALSNLDRQVQLMLGQIEQPADHQRLEQQREAVRIYQQAFNELKQADQRR 133

Query: 446 EQGQRVIGLSLTGLHALVGEVQQ------NAQMIEKLAEESATIGGVLTVIRSIA----- 494
           E  + V+G S      L+G VQ+      N    +   + SA +      +R        
Sbjct: 134 EASRDVLGSSADKAVDLIGRVQRSLLQGANINQYQHAVDVSALLQQARFQVRGYTYSGNA 193

Query: 495 --DQTNLLALNAAIEAARAGEAGRGFAVVADEVRSL--AQRTAGATAEIQSLIAGLQSAA 550
              QT L A++ A+   RA  A     V A+   SL  A    G   +  +     Q A+
Sbjct: 194 DYQQTALKAIDQALAELRALPA----KVPAEHAASLDDAATAMGGYRDAVTQFGNAQLAS 249

Query: 551 HQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSGAVS 607
            Q++Q M   VE      Q +Q    +  E+  A    ++T + +A V A   G ++
Sbjct: 250 EQALQRM---VEQGTVLLQASQMMTASQTEVRDAAAAQAKTLLTVATVLALALGLLA 303