Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  209 bits (531), Expect = 4e-58
 Identities = 172/573 (30%), Positives = 283/573 (49%), Gaps = 28/573 (4%)

Query: 97  SLVDLDVFSKTALLAAGKLAGDPQALLLQAERELGANLEQLSQYAISVNSPEAARYLPPL 156
           +L  LD FSK     A          LL    ELG   + +S Y +S+N           
Sbjct: 79  TLAKLDAFSKQQAYLATTFKSPENVKLLG---ELG---DTISAYKLSLNKMRQG--YDAT 130

Query: 157 LAASQHLGKLSLARDKLVTSGRAEL-----ADDVEREVSNIRSQA--DLLE-QLPLLGVK 208
            AA   +   ++  D+ + +   E+     AD V      + S+A   LL+ ++ + G  
Sbjct: 131 RAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYI 190

Query: 209 ASAESSADDFSALMGLE----NTGKTEAQDTGVDLK-RELNSLLTRYPAELKRTREQIQQ 263
           A   SSA++ +AL  L+    +T   + Q    D + ++  + +  Y   +++ R+ +  
Sbjct: 191 AE-NSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVAN 249

Query: 264 -RTDLAAQTHQKIDTVQHAIAGLEPVVRAQHGKIQG-EVRLMQGVMIGLILLIALLIDTL 321
             T  A  T Q  D V+ + A  +  ++ +   I+  + R +Q +   L LL+ +L   L
Sbjct: 250 ITTSRAEMTVQGADIVKRSDALYQ--IQLERRDIESTQARSLQAIATLLALLVGVLAAVL 307

Query: 322 -QRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRAYLVDLVGTIRG 380
             R++ R L +   A+   A GD +Q + + + + EL  ++  + R+   L +L+  IR 
Sbjct: 308 ITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRD-ELGVLQQGIARMGTTLRELISGIRD 366

Query: 381 NAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGASRS 440
              ++  ++  L+ ++     GA  Q  +T Q+  ++ E+ AT+Q+VA +A QA+ A+  
Sbjct: 367 GVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEVARNAEQASHAATG 426

Query: 441 AGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTVIRSIADQTNLL 500
           A      G RV+G ++  +  L  ++ ++ + +  L +ES  IG V+ VI+S+A+QTNLL
Sbjct: 427 ADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVMDVIKSVAEQTNLL 486

Query: 501 ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIAGLQSAAHQSVQGMRAQ 560
           ALNAAIEAARAGEAGRGFAVVADEVR LAQRT  +T EI+ LIA LQ    Q    M+  
Sbjct: 487 ALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQHGTQQVANAMQGS 546

Query: 561 VEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSGAVSEIRDNSERIHQMG 620
               +++ + A+ A  +L+ I   + +I     +IA    QQS    EI  +   +  + 
Sbjct: 547 RALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAEEISRSILNVRDVS 606

Query: 621 EDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFRV 653
           E       +  +    L  LGGQL T V  FRV
Sbjct: 607 EQTAAASDETAASSVELARLGGQLQTLVSQFRV 639