Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  179 bits (453), Expect = 3e-49
 Identities = 122/342 (35%), Positives = 180/342 (52%), Gaps = 4/342 (1%)

Query: 310 LILLIALL--IDTLQRRLARVLTNLAPA-LSTWAEGDFSQPIALGKTNRELHDIEASLNR 366
           LIL++A+L     L R L   L  L    L     GD S  + L   + E+  +  + N 
Sbjct: 147 LILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLASGD-EVGQMAGAFNA 205

Query: 367 LRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQQ 426
           +++    +V T+  +A ++   +  LA   S +  G   Q  +T Q   ++ E+ AT+  
Sbjct: 206 MQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSATVHH 265

Query: 427 VAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGV 486
           +A  A      S++A      GQ V+      +  L   VQQ A+MI +LAE+S  I GV
Sbjct: 266 IAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQLAEDSQKINGV 325

Query: 487 LTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIAGL 546
           ++VI SIA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA+R   +T EI ++++ L
Sbjct: 326 VSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMVSAL 385

Query: 547 QSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSGAV 606
           QS    +V+ M+     A+   +QAQ A  AL EI GA+  + E+  +IA    QQS   
Sbjct: 386 QSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVA 445

Query: 607 SEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAV 648
            E+      I  + E  + +     +    L  L G+LN A+
Sbjct: 446 EEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAI 487



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 90/433 (20%), Positives = 167/433 (38%), Gaps = 44/433 (10%)

Query: 26  WWSQRALERPYLLMERYLGLSQTFQNQAA---RNIDDYLASGDALRLSSASQSLESLLQQ 82
           W + +AL RP  ++    G + T+  +A    RN   ++A   A  L         +L+ 
Sbjct: 58  WPAGQALPRPANVISWSTGQTPTYAGEALDALRNAQGWVALPSAWILGENPPRGAQVLRN 117

Query: 83  LDELPADLAQNLRPSLVDLDVFSKTA---LLAAGKLAGDPQALLLQAERELGANLEQLSQ 139
            D+  A LAQ+     V  D FS  A   L+    + G  Q L+    R L + L  L  
Sbjct: 118 GDQQLAVLAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLI----RFLLSQLNTLKD 173

Query: 140 YAISVNSPEAARYLPPLLAASQHLGKLSLARDKLVTSGRAELADDVEREVSNIRSQADLL 199
             + V          PL A+   +G+++ A + + ++          R VS +   A  L
Sbjct: 174 VMLHVEKTGDLSARVPL-ASGDEVGQMAGAFNAMQST--------YHRVVSTVAHSAAQL 224

Query: 200 EQLPLLGVKASAESSADDFSALMGLENTGKTEAQDTGVDLKRELNSLLTRYPAELKRTRE 259
           +     G    A S +D    ++G ++  +T+   T ++   E+++ +         TR+
Sbjct: 225 DS----GAARLAASMSDVRHGMLGQQS--ETDQAATAIN---EMSATVHHIAQHAGATRD 275

Query: 260 QIQQRTDLAAQTHQKIDTVQHAIAGLEPVVRAQHGKIQGEVRLMQGVMIGLILLIALLID 319
             Q    LA      +  VQ +I+GL   V+     I+      Q +  G++ +I  + +
Sbjct: 276 LSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQLAEDSQKIN-GVVSVIHSIAE 334

Query: 320 TLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRAYLVDLVGTIR 379
                    L  L  A+     GD  +  A+     E+ ++   +      +  +V  ++
Sbjct: 335 QTN------LLALNAAIEAARAGDLGRGFAV--VADEVRNLAKRVQTSTDEITTMVSALQ 386

Query: 380 GNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGASR 439
               + V       + SS   D   RQA +     ++L E+   + Q+    +Q A A+ 
Sbjct: 387 SGTRDAV----EFMQESSYKADDCVRQAQEAG---EALAEITGAVAQMRESNTQIAVAAE 439

Query: 440 SAGQAVEQGQRVI 452
              Q  E+  R +
Sbjct: 440 QQSQVAEEMNRAV 452