Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

 Score =  192 bits (488), Expect = 3e-53
 Identities = 122/340 (35%), Positives = 191/340 (56%), Gaps = 2/340 (0%)

Query: 306 VMIGLILLIALL-IDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASL 364
           VM+   +L+ LL +  + R L   +  L   ++  ++G F+  +   +   EL  +  + 
Sbjct: 208 VMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVD-SRREDELGRLARAA 266

Query: 365 NRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATI 424
           N LR +L D VG ++ NA+E+ G+S  L  ++  +  G   Q   T Q+  ++ E+ AT 
Sbjct: 267 NTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSATA 326

Query: 425 QQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIG 484
           Q+VA  A++AA A+  A  + + G++V+  ++  +  +  E+   A +I  L  +S  IG
Sbjct: 327 QEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIG 386

Query: 485 GVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIA 544
            VL VIR IA+QTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTA + AEI  +I 
Sbjct: 387 KVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIE 446

Query: 545 GLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSG 604
            +QS A ++V+ + +  + ++  A+Q + A   L  I  A++ I +   +IA    +Q+ 
Sbjct: 447 AVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTS 506

Query: 605 AVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQL 644
              +I  N   I ++   N   +      G+ L  L GQL
Sbjct: 507 VAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQL 546