Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  197 bits (501), Expect = 1e-54
 Identities = 161/531 (30%), Positives = 259/531 (48%), Gaps = 34/531 (6%)

Query: 128 RELGANLEQLSQYAISVNSPEAARYLPPLLAASQHLGKLSLARDKLVTSGRAELADDVER 187
           R+ G  +EQ+S  +I +        L  L A +  +  LS    +L+ +       D   
Sbjct: 38  RQAGVAIEQVSVPSIKI--------LDELTALNLRMRTLSY---RLLLNREPATQRDTLD 86

Query: 188 EVSNIRSQADLLEQ--LPLLGVKASAESSADDFSALMG----LENTGKTEAQDTGVDLKR 241
            +    SQ D   Q  LP++ V A  +++ D +  L+     LE+  +T +Q   +D   
Sbjct: 87  MLDQRNSQIDRARQAYLPMI-VAADEQAAFDQYGQLLNQYRQLESRMRTLSQADRLD--- 142

Query: 242 ELNSLLTRYPAELKRTREQIQQRTDLAAQTHQKIDTVQHAIAGLEPVVRAQHGKIQGEVR 301
           EL  LL R   +L    EQI +  D    T  +I+T Q      +        +  G   
Sbjct: 143 ELRDLLNR---DLLANSEQINKVMD----TLVRINTDQTRATNEKAA-----NQYAGAFA 190

Query: 302 LMQGVMIGLILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIE 361
           L+ G+++   +L       L R + + +          A+GD +  I    T+     + 
Sbjct: 191 LVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVIRAEGTDEAARLLR 250

Query: 362 ASLNRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELE 421
           A + R++  L D +  I G+A ++  ++  L  ++     G ++Q  +  Q   ++ E+ 
Sbjct: 251 A-MARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMT 309

Query: 422 ATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESA 481
           + +++VA +A   + AS  A ++   G+ ++  ++  +  + G+VQ  A++I  LAE+S 
Sbjct: 310 SAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSR 369

Query: 482 TIGGVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQS 541
            IG VL VIR +ADQTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT  +T+EI+ 
Sbjct: 370 DIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIER 429

Query: 542 LIAGLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQ 601
           +I  +Q    ++V+ MR   E AE+T   A+ A  ALD I GA+  I+E  + IA    +
Sbjct: 430 MIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEE 489

Query: 602 QSGAVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFR 652
           Q+    E+  N   I+ +   +     Q  +    L  L   LN  V  FR
Sbjct: 490 QAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFR 540