Pairwise Alignments

Query, 404 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 465 a.a., Probable transmembrane protein from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 104/453 (22%), Positives = 159/453 (35%), Gaps = 82/453 (18%)

Query: 4   SFVTQCPHCQARFRVNHAQLSVARGVVRCGSCLQVFNAARQLLEQRGKASA--------- 54
           S VT+CP C   F+V   QL ++ G VRCG C  VF+A   L E    ASA         
Sbjct: 2   SLVTRCPACTTTFKVVRDQLRISDGWVRCGRCSHVFDATLDLHEAPDGASASASPAMQGG 61

Query: 55  ---------PEPEA---PLALTPEPARAISQKQWTAEELDLDNLDLDEELAKLERRE--- 99
                    PEP+A   P  + P PA   +  Q  AE+ D      D+E    + R+   
Sbjct: 62  YMPGLVESPPEPKAAPSPAPVPPPPA-VEAPAQPAAEDADF----FDDEPEHHQSRQDPL 116

Query: 100 -----------IQHTLPA-----------GADRRQPGTDRRQKEESFSASRDTV---KAE 134
                      +   LP+           G    +P +D    E ++   + T+    + 
Sbjct: 117 PEASGPSLPPAVMPPLPSPLDFSLALPEHGIAADEPWSDLDATEPAWKPPQRTLPPFPSI 176

Query: 135 EEKWASSLFSEPP---------EERLHV----TEDEPEPATRQRTEPSMSFHTDELDEEP 181
           +   AS+  S PP         + R+        D+ E    Q  +        +     
Sbjct: 177 DLNLASAPPSPPPPVPPLPAKSQARMRTLVERASDDGEGEREQEEKDHDQVQMQKALRRA 236

Query: 182 PLRSTPVDDDIDPPFTPLTKAAEPEDRLQPRRKRPRPEAGVHDDVLQDLEDDPLHLY--- 238
            ++S  +            KAA     +Q  +    P+  +        E  P H     
Sbjct: 237 RIKSAKIASAKAREERAAAKAASSASAVQAVQTESEPDFSLS----STFEPPPGHPLSEE 292

Query: 239 ---AQKRPSGWGRRLVWLLLVLMAAGG---LAGQYIAYQFDDL-ARQDAYRPWFQQLCPT 291
              A+  P  W R+ V +LLVL+A      L  Q I ++ D + ARQ   RP    LC  
Sbjct: 293 DDPAETLPGFWQRKSVRVLLVLLAVLAVLLLVVQVIRHERDGIAARQPNLRPALAMLCQY 352

Query: 292 LGCTVPSRVDIAHIKSSNLVVRSHPDFAGALVVDAIIYNRATFSQPFPLLELRFADLNGS 351
            GC + +   I  I             +    +   + N AT     P +EL   D    
Sbjct: 353 TGCELAALRQIGDIVIEGAAFAREKSGSNDYRLSFTLRNGATVPLAMPAVELSLLDTQER 412

Query: 352 LIASRRFKPAEY-LSGELAGVSEMPSQTPIHIS 383
            +  R   PA+Y     LA  ++  +  P+ +S
Sbjct: 413 AVVRRVLMPADYGAPAVLAARADRAASLPLTLS 445