Pairwise Alignments

Query, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas simiae WCS417

Subject, 326 a.a., tRNA-U20-dihydrouridine synthase from Kangiella aquimarina DSM 16071

 Score =  417 bits (1072), Expect = e-121
 Identities = 211/324 (65%), Positives = 253/324 (78%)

Query: 4   VRIGPYTLQNGLILAPMAGVTDQPFRQLCKRLGAGLVVSEMVTSDMSLWNTRKSRMRMIH 63
           +RIGPY L+N LILAPMAGVTD+PFRQLCK LGAGL VSEM+ ++  L NTRKS  R  H
Sbjct: 1   MRIGPYQLENPLILAPMAGVTDRPFRQLCKELGAGLTVSEMIAANPKLRNTRKSIQRSNH 60

Query: 64  EGDPEPRSVQIAGGDAQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQL 123
           +G+P  RSVQIAG + +MLA +A+ NV+ GA+IIDINMGCPAKKVC KAAGSALL+D +L
Sbjct: 61  QGEPGIRSVQIAGAEPEMLAQSAQYNVQNGAEIIDINMGCPAKKVCKKAAGSALLQDPKL 120

Query: 124 VAEILQAVVAAVDVPVTLKIRTGWDRDNKNGLTVAKIAEQAGITALAVHGRTRADLYTGE 183
           V +IL AVV+AV+VPVTLKIRTGW+ DN+NG+ +A+IAEQAGI ALAVHGRTRAD Y G 
Sbjct: 121 VEDILNAVVSAVEVPVTLKIRTGWNHDNRNGVQIAQIAEQAGIQALAVHGRTRADKYLGN 180

Query: 184 AEYDTIAAIKQAVSMPVFANGDIDSAEKARRVLHATGADGLLIGRAAQGRPWIFREIEHF 243
           AEYDTIAAIKQ+VS+PV ANGDI S EKAR VL  TG DGL+IGR AQG PWIFRE+ H+
Sbjct: 181 AEYDTIAAIKQSVSIPVVANGDITSPEKARFVLDYTGVDGLMIGRGAQGNPWIFREVWHY 240

Query: 244 LRTGEVLPAPELVEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATLPGAREFRAHF 303
           L+TGE L  P   EV ++LL H+ ALH FYG VMG RIARKHV WYL     A EFR  F
Sbjct: 241 LQTGEKLSPPSWQEVRQVLLGHINALHEFYGAVMGPRIARKHVSWYLQEQADANEFRRTF 300

Query: 304 NRLDDTEAQCANVREFFSERYKSL 327
           N ++D   Q   +  +F ++ +++
Sbjct: 301 NAIEDGAEQLDVLDRYFEQKQQAI 324