Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  267 bits (682), Expect = 3e-75
 Identities = 177/543 (32%), Positives = 289/543 (53%), Gaps = 18/543 (3%)

Query: 384 SLSRDLAASNAEIAA--KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIH 441
           ++  D+A   A  A+  K+EFLA +SHEIRTP+NG+LG T LL  + ++ +Q DY+ TI 
Sbjct: 269 NIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIE 328

Query: 442 SAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQ 501
            + + LL +INEILD SK+E+G++ LD + F+L  LI+D L+I    A  + +EL+S I 
Sbjct: 329 KSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIY 388

Query: 502 PQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDDRSTK-PRLRIAVQDSGLP 560
              P  + GDP RL+Q + +L+ NA++ T EG +++   L+D      +LRI+VQD+G+ 
Sbjct: 389 RDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIG 448

Query: 561 MEAAERDALLHSELHSKNFFSATRLNGHLGLVIARQLILLMNGEFGIKSGSHQGSTLWLT 620
           +   +   L  +   + N  +       LGLVI+++LI  M GE G+ S   +GS  W++
Sbjct: 449 LSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWIS 508

Query: 621 LPLDPERLEHPTSDLDGPLKGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALAL 680
           L L P+  +   +    PL G R  +VD ++  R+ L  Q    GL+VS   S  + L  
Sbjct: 509 LNL-PKAHDDAEALPPQPLLGRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQG 567

Query: 681 LRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIAR 740
           ++  +     F+  +L  N+  ++  QL     +     H   +++      A       
Sbjct: 568 VQAASQAGLPFEFAVLGANLGNLSPEQL-GHYHQQLERYHCQCVVLCPTTEQALYHPYLP 626

Query: 741 NCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVL--NTPAAITVPTDFRILVAED 798
           N G  ++L+KP     L+  L  EL Q      P RP+   + P     P   +IL  +D
Sbjct: 627 N-GHGQLLSKPTCTRKLRRLLL-ELVQ------PRRPLAEGSNPNGQRRP---KILCVDD 675

Query: 799 NSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMPILDGFSATQQLRA 858
           N+ +  +++ +L  L       +NG  A++A++ + +DLVLMD +MP +DG + T+Q+R 
Sbjct: 676 NAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRL 735

Query: 859 WEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELSQLRELVEFWVAQRQQRP 918
           WE +      P+VALTAH ++  K     +GMD ++ KP+   QL ++V  W       P
Sbjct: 736 WENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKWTGLSLGTP 795

Query: 919 EHA 921
           + A
Sbjct: 796 QQA 798