Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1373 a.a., Sensor kinase protein RcsC from Alteromonas macleodii MIT1002

 Score =  225 bits (573), Expect = 2e-62
 Identities = 163/579 (28%), Positives = 286/579 (49%), Gaps = 50/579 (8%)

Query: 371  LGERQRAIVEARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLS 430
            + E+  ++      L + L  +      K+EFLA +SHEIRTPMNGV+GM  LL  + L+
Sbjct: 803  VSEKTASLKAQANDLKKALEQAEEATKLKSEFLANMSHEIRTPMNGVIGMLGLLKKSNLT 862

Query: 431  VKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAE 490
             +Q   V    S+ N LL LIN+ILD SK+E+ ++E++ V+FD+  LIE         A+
Sbjct: 863  TEQSQRVNIASSSANSLLALINDILDFSKIEADKLEIESVEFDVRELIESIAQSVAHLAQ 922

Query: 491  QQNVELISFIQPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVAL--DDRSTKP 548
            ++ ++++  +       I+ DP+R++Q + +LL NA++ T++GE+ +   L   +     
Sbjct: 923  EKGLDVVVDLSKVSESKINSDPSRIQQILTNLLSNAVKFTEQGELSVTAELLPTNNQNTA 982

Query: 549  RLRIAVQDSGLPMEAAERDALLHSELHSKNFFSATRLNG--HLGLVIARQLILLMNGEFG 606
             + IAV D+G+ + A++   L   +  ++   S TR  G   LGL I ++L  L+ G+  
Sbjct: 983  LMHIAVADTGIGIPASKLPHLF--DAFTQVDASTTRRYGGTGLGLSITKKLCQLLGGDIS 1040

Query: 607  IKSGSHQGSTLWLTLPLDPERLEHPTSDLDGPL--KGARVLVVDDNDTCRKVLVQQCSAW 664
            + +   +GS   +T  +   R     + +   L  +    L++DDN + R+ +  Q   W
Sbjct: 1041 VTTELGKGSRFDVTCEI---RYAEQRNAVRPQLAKQDMCCLIIDDNASTRRAMQSQLKLW 1097

Query: 665  GLNVSAVPSGKEALALLRTKAHLRDY--------FDVVLLDQNMPGMTGMQLAAKIKEDP 716
            G+      S +EA++L     +L+D          DVV L++             + ++P
Sbjct: 1098 GVLTLTASSIEEAISL-----YLKDSEQEIPAIPIDVVFLEKAEEEEFSQHFGQILLDNP 1152

Query: 717  SLNHDILLIMLTGISNAPSKIIARNCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPR 776
               H   L+++T +S+  S ++     +   L KP+    L   + +E    S     PR
Sbjct: 1153 RTKH-TRLVLMTQLSDMESSVVYGGIDVDESLPKPLTSSDL-IRIVEESVNTSDYEAKPR 1210

Query: 777  -------PV---------LNTPAAITVPTD----FRILVAEDNSISTKVIRGMLGKLNLN 816
                   PV         + +P      T     +RIL+ EDN+I+  V   +L      
Sbjct: 1211 FRKREDDPVHIIEGNTQHVQSPEENAKSTSDDNAYRILLVEDNAINQIVATNVLESEGYE 1270

Query: 817  PDTASNGEEALEAMKAQR----YDLVLMDCEMPILDGFSATQQLRAWEVSHQRVRTPVVA 872
             D A+NG EALE +K+ +    Y  ++MDC+MP +DGF AT+ +R         R P++A
Sbjct: 1271 VDVANNGVEALELLKSSKLKAHYSAIVMDCQMPEMDGFEATKLIRYGAAGDVYKRVPIIA 1330

Query: 873  LTAHILSEHKERARQAGMDGHMAKPVELSQLRELVEFWV 911
            +TA+ +   K+   +AGMD  + KP+E +++   ++ W+
Sbjct: 1331 MTANAMQGDKDMCMKAGMDDFLTKPIEHNKVTSTLQHWL 1369