Pairwise Alignments

Query, 198 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 209 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 1e-23
 Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 9/198 (4%)

Query: 5   LFSVYLKMLVLYSPFFVLSCFISLTRGYSSKERRRLAWKVALATLVSSVLLYLFGRVIFS 64
           L +    +LV   P  +   F++LT G +  +R ++A + ++       +  LFG  I +
Sbjct: 7   LINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALFGLAILN 66

Query: 65  VFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNVQQ---------DVTIVPLTIPLTV 115
           + GI++ AFRI  G +LF  +  M   K   + +   +         ++ + PL +PL  
Sbjct: 67  LLGISLGAFRIAGGLLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPLALPLIA 126

Query: 116 GPGTIGALLVMGVSQPHWDDKITAILSIALASLTVGVVLYLSNRIERILGDQGLQIVSRL 175
           GPG I A +++  S     + +  IL +A A   V   L +S R++R LG+ G  I++RL
Sbjct: 127 GPGAISATVLLAGSMKTTVEMVVLILILAFAMALVYAALIVSERMDRFLGNTGRAILTRL 186

Query: 176 MGLFVCALAAQIIFTGVR 193
           +G+ + AL+ Q +  G++
Sbjct: 187 LGVLLAALSVQFVVDGIK 204