Pairwise Alignments

Query, 702 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

 Score =  149 bits (377), Expect = 4e-40
 Identities = 185/723 (25%), Positives = 286/723 (39%), Gaps = 101/723 (13%)

Query: 20  ALTLPASPITAPAMDDERVDLNTPTTAGSRLNLSALQTPGSVESQTGTQIRERGDASVQD 79
           +++L A+ IT    D+    +   ++   +     + TP SV       +++    S+QD
Sbjct: 47  SISLGATSITGEEQDNTSYQVEKASS--QKYTAPLVDTPRSVTVVPQQVLKDTAATSLQD 104

Query: 80  AISRATGISRTGTPGDGGTSLS----ARGFTGQGSVMQLYDGNRMYMGMGTSTFPVDTWS 135
           A+    GI  T   G+GG         RGF  QG      DG R   G     F      
Sbjct: 105 ALRTVPGI--TFGAGEGGNPQGDRPFIRGFDAQGDTY--LDGVRDTGGQSREIF-----D 155

Query: 136 VERVDVLRGPASVLYGEGATGAVINTVAKKPFEGEIENHIRLGYGTYDRQQQALDSGGS- 194
           +E ++V +GP S   G G+ G  +N V+K P   +  N     YG+   ++  LD     
Sbjct: 156 IESIEVSKGPNSSFGGRGSAGGSLNLVSKTPQARDFTNG-GFTYGSDQTRRYVLDVNRQF 214

Query: 195 LTDTLSYRLNLNRLHSNGFIDRGDSSSDFFSGALRWQAADNLSFTLAS------------ 242
           L D+ ++RLNL   H      R   + D      RW  A +L+F L +            
Sbjct: 215 LDDSAAFRLNLMS-HEQNVAGRDAVNYD------RWGVAPSLTFGLGTPTRVNLSYYHME 267

Query: 243 --DYGDQRPQNYFGTPLINGQLHKGLRDKNYNVSNDTQHYNDQWTRLTSA--------WQ 292
             D  D      +G+      +H    D     SN+     D+  R T A          
Sbjct: 268 SDDLPDSGIPYGYGSSTATAHVHDKPNDGGD--SNNFYGLKDRDFRKTRADISTFSIEHD 325

Query: 293 INDNISARNELYYLKNQRRWQNAENYNFTN-----------GQLTRSGNFGIK------H 335
           +NDN++ +N L      R     ++Y  T            G + R  N  +       +
Sbjct: 326 LNDNMTLKNTL------RHGSTGQDYILTQPDDSKFNVNRFGTVWRRANSRVSTTTTTTN 379

Query: 336 NQEQVGDRQTFTFKHTLF-GLDSQTLAGVEYNRIRFRLASNSPFNDVLA----GGQPIDI 390
             +  G  Q   FKH+   GL+     G E     + ++ N+     +A    GGQ   +
Sbjct: 380 QTDLFGSFQALGFKHSYSTGLE---FTGEETRVSNYTISPNTNPVCTVAKGSLGGQCTSL 436

Query: 391 LHPAPAAFNSQNAFAPLFSTTTKTVA--GFAENRLQLTDKLSLVTGIRRD-YAHVERDDL 447
            +P P    + +     + T TK  +   +  + ++L  K  L  G+R D +  V   D 
Sbjct: 437 SNPNPDDAWTGSIARNYYGTATKATSRGAYVFDTIELDPKWLLNVGLRYDTFDTVANTDS 496

Query: 448 RNGGQTDKTLTGN-NGKAGLVYAITPDTSIYGQYATSTDGVGGLIS-------LSPGQQQ 499
             G    K  +   N +AGLV+    + SIY  YATS    GGL+        LS G   
Sbjct: 497 ATGRSKIKEDSQFFNWQAGLVWKPVENASIYASYATSATPAGGLVGEGSDGNPLSAGAAS 556

Query: 500 FDLSTAKQT--EIGIKQAFWNQRGEWTLAAYHIVKKKLLTDVPGDPDLKQQVGQQSSRGL 557
            DL   +    E+G K   ++ R   T A +   KK   T +  D    Q  G+    G+
Sbjct: 557 SDLQPEETVNYELGTKWDLFHDRLSLTAAVFRTEKKN--TRILVDALTYQNAGESQVDGV 614

Query: 558 EASLALQLPDAWQLQANAAIVHAQYDDFKQDVGG-----VQVSRDGNRPVDVPRRTANLW 612
           E S + ++ D WQ+ A  + + ++    K  + G        S  GN+  + P+ T +LW
Sbjct: 615 ELSASGKITDQWQVFAGYSYLDSEL--VKSGLNGRNGVVSSGSNKGNQMPNTPKNTFSLW 672

Query: 613 LSKAVTDDIRAGAGVRYVDARYADMANQNELPSYTVVDATVSWKAMRNTTLGLQLNNLFD 672
            +  VT  +  G G  YVD  Y D  N   +PSYT  DA  S+K  +N  L L + NL D
Sbjct: 673 TTYDVTSKLTIGGGAFYVDQVYGDAGNTVYVPSYTRYDAMASYKLTKNVDLQLNVQNLTD 732

Query: 673 RTY 675
           + Y
Sbjct: 733 KLY 735