Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  211 bits (536), Expect = 3e-59
 Identities = 125/325 (38%), Positives = 193/325 (59%), Gaps = 5/325 (1%)

Query: 15  AVLLVSCVLSLGFGPARVPVEVVWRIVLYKAFGVGEVNWPAGQEHIVWLIRVPRMLLGAL 74
           A+LL + +  +  G   +  +VV +++  K +    V  P   E +VW  R+ R L+ A 
Sbjct: 9   ALLLAALLAGVAIGETAISPQVVLQVLANKLWAASYVLDPI-DEGVVWNYRLTRALVAAA 67

Query: 75  VGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEVIGLLTLPLAAFIGA 134
            GAGLA  G +LQ++ RNPLADP+LLG+++GA+ GAV+V L +G   GL++L   AF+GA
Sbjct: 68  CGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVAL-IGVGGGLISLSAGAFVGA 126

Query: 135 LLSMLVVLAVASRNGRLE-SDRLLLCGVAVSFVMMA-AANLLLFMGDHRAASAVMFWMLG 192
           + +  +V+ +A  +G    + +++L G+A S +  A  A L+        A  ++FW+LG
Sbjct: 127 MAAFALVILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSASSEQARGILFWLLG 186

Query: 193 GLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVTLGLNARNVRLKVFLVAS 252
            L   RW  + +     + GL + L   R L+A   G  +A +LG+  R V+  +   A+
Sbjct: 187 NLSGVRWPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGIPVRRVQFVLVGCAA 246

Query: 253 LMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFLVWVDVAARTLIAP 312
           L+T V+VSI GSIGFVGL++PH  R L+G  H RLLP   L G+LFL+  DV +RTLI  
Sbjct: 247 LVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFLIAADVLSRTLIKG 306

Query: 313 EDLPIGVATAAIGG-LFFIGLMRRR 336
           + +P+GV TA +G  +F + L+ RR
Sbjct: 307 QVIPVGVVTALVGAPVFALILIGRR 331