Pairwise Alignments
Query, 812 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417
Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417
Score = 449 bits (1155), Expect = e-130
Identities = 294/848 (34%), Positives = 439/848 (51%), Gaps = 72/848 (8%)
Query: 14 HGMTCSLLLGTAATAGV-VLSTDAM-AASAVQHYIIAAGPLDNALSQFAARANVILSFSP 71
H + S+ + AA + V ST A ++SAV + I AG L AL+ A +A ++L+F
Sbjct: 9 HPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAFDA 68
Query: 72 QQTARLNTTGLEGDYSVEQGFALLLQNTGLQAVTQAPGSYVLQAIP--AGQLTLAPTTVS 129
T + GL G Y + LL +GLQA+ + Y L++IP G + L TT+S
Sbjct: 69 SLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTIS 128
Query: 130 TYQQAGFNQEIAGDV-GYKAQNSRIGTKTSTPLSETPRSVSVVTGQRIKDQKSQTLTEVL 188
QA + G V GY A S GTKT T L ETP+S+S+VT +++ Q +++L ++L
Sbjct: 129 GAYQA---ESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQIL 185
Query: 189 GYVPGIFAPPFAAGDGLAGDLFFIRGFNATDYGYGLLRDGLRVQGNRYDTTS-EPYGLER 247
Y + P D IRGF+ Y DGLR+ +R + + LER
Sbjct: 186 RYSAAVI-PETRGATASRLDQLTIRGFSPATY-----LDGLRMPSSRDALPQKDAFDLER 239
Query: 248 VEIFRGPSSLLYGENAPGGLVNLVSKHPTATPQGEVQLGYGSNNRRQLGVDISGPLNDSD 307
VE+ RGP+S+LYG+ P G++N+VSK P TP EV + YG+ N+++ D+SGP++D
Sbjct: 240 VEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQG 299
Query: 308 NILGRVVMLGRKSDTQTDHVPDDRLYIAPSLTLNFDDYNTLTLLANYQKDHTNLELG-LP 366
RV L +D Q +H R ++ + T DD +LTLL ++QKD G +P
Sbjct: 300 VYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSVP 359
Query: 367 AAGTLLTNPNGK-LSKHTMLGDPDWNTFEREAWSTGYEFSHSFNDDWQFRQNSRYMQSRI 425
A G++L +P G+ + G+ ++ +RE +S G+ F H F+D W RQN+RY++S
Sbjct: 360 AWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEG 419
Query: 426 NRHETWPSTLNNRGFGTQLNMTAYDRYNKSMV--------YSLDNQLEGKFQVGGLENTV 477
+ + L M Y +S + Y+LDNQ++ KF G L++T+
Sbjct: 420 QYRSLYSNYL----------MADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTL 469
Query: 478 LFGASYDRTSFNQDWDAGF--AG-TINVYNPVYLRDPLTPVAVQNTLLEQQMKGVYAQVQ 534
L G Y TS + +G AG T++++NPVY P + + GVY Q Q
Sbjct: 470 LMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVYLQEQ 529
Query: 535 SKYDHWLFLLGGRQDWVDSDFRDKV---NKASNTRSEDRKFTYQGGVMYQFDNGLTPYVS 591
K+D W+ LLGGR DW +D + S + + + FT + G++Y FDNGL PY S
Sbjct: 530 MKWDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYAS 589
Query: 592 YSTAFVPVQQISNAGSPLKPITSSQYEVGVKYEPIGWDTAMTLSVYDLRK-------EDD 644
Y+ +F P GS KP QYE+G+KY+P G ++ +T +++DLR+ D
Sbjct: 590 YAESFNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDP 649
Query: 645 TYLDATTNSYRQVGESRAKGAEVEVNSNITPNLNVTAAYTYTDARITKDSAT-------- 696
T+L T Q GE +++G E+E +++ NL++TAAY Y D RI+K + T
Sbjct: 650 THLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISD 709
Query: 697 ------SLVEGRQMTGVPRNQASVWGKYRFLDGQLKGLSLGGGVRYFDSTFSYTAPTLYG 750
EG GVPR+ AS W Y DG+LKG +G G RY S++ TA T
Sbjct: 710 IGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANT--- 766
Query: 751 KLDAGSVTLVDAAVGYQIDK------HWSVDVNAKNLFDKEYVSGCNDAGRCYWGDSRTL 804
L TL DAAV Y I + + +NA NL +KEYV+ C C++G RT+
Sbjct: 767 -LKVPGYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTV 825
Query: 805 LGTVSYNW 812
+ +Y W
Sbjct: 826 QASATYQW 833