Pairwise Alignments

Query, 168 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score =  135 bits (341), Expect = 3e-37
 Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 1/156 (0%)

Query: 10  VQNIYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHA-AQILEPRDYLATIARG 68
           + ++Y  H SWL  WL+ +L NA DAAD++ DTF+R+L      AQ+ EPR YL T+ + 
Sbjct: 15  LSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQMQEPRAYLVTVGKR 74

Query: 69  LVIDRYRRHAIEQAYKQTLAERPDATAISEEDKAIIIETLVAVDKALAGLGERARRIFML 128
           L+++ ++R ++EQAY   LA  P+A   S E + +++ETL A+D+ L GL    RR F+ 
Sbjct: 75  LLVNFHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDELLDGLPVLVRRAFLW 134

Query: 129 SQVEGLTYQQIADELQVSLTTVKKHMIRALTECSLI 164
           SQ+EGL Y+ IA+ L VS  TVK++M +A   C L+
Sbjct: 135 SQLEGLGYRDIAERLDVSERTVKRYMAQAYEHCLLV 170