Pairwise Alignments

Query, 168 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 3e-40
 Identities = 69/149 (46%), Positives = 107/149 (71%)

Query: 13  IYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHAAQILEPRDYLATIARGLVID 72
           +Y+ HH+WL GWL+ ++  +  AAD+A DTFVR+L  R  + + EPR YL++IARGL+ID
Sbjct: 15  LYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMID 74

Query: 73  RYRRHAIEQAYKQTLAERPDATAISEEDKAIIIETLVAVDKALAGLGERARRIFMLSQVE 132
           ++RR A+E+AY++ LA  P+A   SEEDK +I+++L  +D+AL  L  R R+ F+L+Q++
Sbjct: 75  QFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLAQLD 134

Query: 133 GLTYQQIADELQVSLTTVKKHMIRALTEC 161
           GL+  Q+A  L VS  TV++ + +AL  C
Sbjct: 135 GLSIVQVAQRLGVSRATVERDLAKALGAC 163