Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 96/367 (26%), Positives = 154/367 (41%), Gaps = 51/367 (13%)

Query: 12  LTASIAAMGMTWTAQAAETIKVGILHSLSGTMAISETSLKDMALM----TIDEINAKGGV 67
           L A++   G+   + AA+TIK+GI    +G +    T   DM  M     I +INAKGGV
Sbjct: 11  LFAAMVLAGVAGHSFAADTIKIGIAGPKTGPV----TQYGDMQFMGAKQAIADINAKGGV 66

Query: 68  NGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFY 127
           +GKMLEA   D A + P  A      +  D V  V G   S S +    ++E+   ++  
Sbjct: 67  DGKMLEAKEYDDACD-PKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMIT 125

Query: 128 PVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRFFLLGTDYVYPRTTNKILR 187
           P        SP +     A   + I     L S +G +A  +     D+V P+    +  
Sbjct: 126 PA-----ATSPEI----TARGYKLIFRTIGLDSAQGPAAGNYI---ADHVKPKIVAVLHD 173

Query: 188 AFLHAKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGK--TAVISTVNGDSNVPF--- 242
              + +G+A   +++     G     T VA  +  +AG K  +++I  +   +NV F   
Sbjct: 174 KQQYGEGIATA-VKQTLEKKG-----TKVAVFEGLNAGDKDFSSIIQKLK-QANVDFVYY 226

Query: 243 ---YKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFQSV-----ENPVN 294
              + EL     +A +  + A  +G E + G D+   +   A+     ++      +P N
Sbjct: 227 GGYHPELGLILRQAKEKGLNAKFMGPEGV-GNDSISQIAQGASEGLLVTLPKSFDTDPAN 285

Query: 295 TKFVADWKAYAKKHNLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQ 354
              V +   +AK    P      T   +   Y  I + A   + AKS D  KV EA+   
Sbjct: 286 KAIVEE---FAKNKQDP------TGPFVFPAYSAIEVIAGGIKAAKSEDTAKVAEAIHAG 336

Query: 355 TFAAPSG 361
           TF  P+G
Sbjct: 337 TFKTPTG 343