Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 85/381 (22%), Positives = 152/381 (39%), Gaps = 38/381 (9%)

Query: 25  AQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKMLEAVVVDPASNWP 84
           A A   IK+G ++S     A  E   K M L  +DEINAKGG+NGK +E +  D  +N  
Sbjct: 23  AHAQGVIKIGEINSYKAQPAFLEPYKKGMEL-AVDEINAKGGINGKKIELISRDDNANPG 81

Query: 85  LFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTG 144
                  +L++++K+ V+ G + S +  ++    ++     FY      E ++  + ++ 
Sbjct: 82  DAVRVAEELISREKIDVLAGAFLSNTGLALADFAKQKK--FFY---LAAEPLTDKIVWSN 136

Query: 145 AAPNQQAIPAVEY----LMSEEGG--SAKRFFLLGTDYVYPRTTNKILRAFLHAKGVADK 198
                  +    Y    ++  E      KR+ ++  +Y Y +++    +  L A     +
Sbjct: 137 GNKYTYRLRPSTYMQVAMLVPEAAKLKKKRWAVVYPNYEYGQSSVATFKTLLKAAQPDVE 196

Query: 199 DIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKATDVPV 258
            + E   P G  D  ++V   +  +     A+ + + G     F +E   +GL   D  V
Sbjct: 197 FVAEQAPPLGKVDSGSVV---QALADAKPDAIFNVLFGADLSKFVREGNTRGL-FKDREV 252

Query: 259 VAFSVGEEE-LRGIDTKPLVGNLAAWNYFQSVENPVNTKFVADWKAYAKKHNLPGADKAV 317
           V+   GE E L  +  +   G +     +  V+ P +  F+  ++A  K +   G+    
Sbjct: 253 VSVLTGEPEYLDPLKDEAPNGWIVTGYPWYGVKTPEHKAFLDAYQAKFKDYPRLGS---- 308

Query: 318 TNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQTFAAPSG------------FTLT 365
                   Y  IH      +KA  TD +K+  A  G     P G                
Sbjct: 309 -----VVGYSAIHSIVAGIQKAGGTDTEKLVAAFKGLQVDTPFGKINYRAQDNQSTMGAY 363

Query: 366 MDKTNHHLHKPVMIGEIQADG 386
           + KT +   K VM+  +  DG
Sbjct: 364 VGKTKNDGGKGVMVDYVYLDG 384