Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 418 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

 Score =  265 bits (678), Expect = 1e-75
 Identities = 167/420 (39%), Positives = 237/420 (56%), Gaps = 37/420 (8%)

Query: 1   MKRRSLIKAFTLTASIAAMGMTW-----------TAQAAET---IKVGILHSLSGTMAIS 46
           ++RR L++     A++  MG+++           T + A T   + VG LHS +GTMAIS
Sbjct: 14  LRRRRLLQG---AAALPVMGLSFGQGQFPTAKVNTTKLAVTDTEVTVGQLHSSTGTMAIS 70

Query: 47  ETSLKDMALMTIDEINAKGGVNGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCW 106
           ET       + ID+INA GGV G+ ++ +  D AS+WP FAEK ++LL  D  A VFGCW
Sbjct: 71  ETGSIQAEQLAIDQINAMGGVLGRKIKVIKEDGASDWPTFAEKSKKLLVNDHCAAVFGCW 130

Query: 107 TSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSA 166
           TS SRK+VLPVFE+ NGLL+YP  YEG E S NV YTG    QQ +  +++   E+   A
Sbjct: 131 TSASRKAVLPVFEKENGLLYYPTFYEGLEQSKNVIYTGQEATQQILWGLDWGAKEK--KA 188

Query: 167 KRFFLLGTDYVYPRTTNKILRAFLHAKGVADKDIE-EVYTPFGHADYQTIVANIKKFSAG 225
           K FFL+G+DY++PRT+ KI R   H +      ++ E Y P GH ++ +++  IK     
Sbjct: 189 KTFFLVGSDYIWPRTSMKIARK--HIENFQKGSVKGEEYYPLGHTNFNSLINKIK---VA 243

Query: 226 GKTAVISTVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNY 285
               + + V G SNV FYK+L   G+      ++  +V E+E+ G+  +   G  ++  Y
Sbjct: 244 KPDCIFAAVVGGSNVAFYKQLKAAGITGDKQFLLTLAVTEDEMTGVGGENFAGFYSSMKY 303

Query: 286 FQSVENPVNTKFVADWKA-YAKKHNLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDV 344
           FQS++N  N KFVA +KA Y K         AV  D  +A Y+G  +W  A EKA S DV
Sbjct: 304 FQSLDNENNKKFVAAFKAKYGK--------DAVIGDVTQAGYLGPWLWKAAVEKAGSFDV 355

Query: 345 DKVREALAG-QTFAAPSGFTLTMDKTNHHLHKPVMIGEIQADGQFSVVWQTQEPIRAQPW 403
           DKV     G +   AP G+ + +D  NHHL     IG+ Q DG F VV ++ E I+  P+
Sbjct: 356 DKVVAGSPGIELKTAPEGY-VKLD-ANHHLWSKARIGQGQLDGTFKVVAESAELIKPDPF 413