Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 397 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

 Score =  317 bits (812), Expect = 4e-91
 Identities = 181/405 (44%), Positives = 242/405 (59%), Gaps = 21/405 (5%)

Query: 3   RRSLIKA----FTLTASIAAMGMTWTAQAAETIKVGILHSLSGTMAISETSLKDMALMTI 58
           RR ++K       L A+    G+  +AQ   T+K+G+LHSLSGT+AI+E SL D   + I
Sbjct: 7   RRQIVKTGGSMIVLGAAGGVAGIA-SAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAI 65

Query: 59  DEINAKGGVNGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVF 118
           +EINA GGV GK +EAVV D AS  P+FAEK R+LL +DKVA + GC+TS SRK++LPV 
Sbjct: 66  EEINAAGGVMGKKIEAVVEDGASENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVL 125

Query: 119 EELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRFFLLGTDYVY 178
            +  GLLFYP  YEG+E    VFY      Q  I AVE++  E+G   K FFL+G+DY+Y
Sbjct: 126 NQAKGLLFYPTYYEGQEQDKRVFYPSQEATQSVIAAVEWMAREKG---KSFFLVGSDYIY 182

Query: 179 PRTTNKILRAFLHAKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVNGDS 238
           PRT NKI +  +   G   K + E Y P GH ++ +I+  IK   A     + STV G S
Sbjct: 183 PRTCNKIAKPAIAKAG--GKVLGEEYAPLGHTEFSSIINKIK---AAKPDCIYSTVVGGS 237

Query: 239 NVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFQSVENPVNTKFV 298
           NV FYK+L   GL      +++  V E E+ GI      G  A   YFQS+++P N KFV
Sbjct: 238 NVAFYKQLRAAGLDGAKQVLLSTVVSENEIDGIGKDNAAGYYACMGYFQSIKSPANEKFV 297

Query: 299 ADWKAYAKKHNLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQTFAA 358
              KA+  K+   G D+ V  DPME  Y  +++W  A EKAKS DVDKV  A AG    A
Sbjct: 298 ---KAFKAKY---GQDR-VIGDPMEVAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEA 350

Query: 359 PSGFTLTMDKTNHHLHKPVMIGEIQADGQFSVVWQTQEPIRAQPW 403
           P G T+ +  TNHH+ K V +G  + DGQF +VW++ + +   P+
Sbjct: 351 PEG-TVRIHATNHHVWKKVRVGRARPDGQFDIVWESPQLVEPNPF 394