Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

 Score =  218 bits (554), Expect = 3e-61
 Identities = 132/376 (35%), Positives = 203/376 (53%), Gaps = 15/376 (3%)

Query: 29  ETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKMLEAVVVDPASNWPLFAE 88
           + I+VGIL+S +G  +    S    AL+ I+EINA GGV G+ + AV  DP SN   +A+
Sbjct: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64

Query: 89  KGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPN 148
              +L+ QD+V V+FGC+ S SRK+V+PV E+ N LLFYP  YEG E S NV YTGAAPN
Sbjct: 65  LAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEGFEYSGNVIYTGAAPN 124

Query: 149 QQAIPAVEYLMSEEGGSAKRFFLLGTDYVYPRTTNKILRAFLHAKGVADKDIEE-VYTPF 207
           Q ++   E++ +  G    R +L+G+DY+YP  +N+I+   +  +  ++K  E  V    
Sbjct: 125 QNSVQLAEFMTTNFGA---RVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVALDA 181

Query: 208 GHADYQTIVANIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEE 267
           G  DY+ I+ +I+         + STV GDS    Y+  A  G     +P+ + +  E E
Sbjct: 182 GERDYRAIMDDIRD---KRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTTSEAE 238

Query: 268 LRGIDTKPLVGNLAAWNYFQSVENPVNTKFVADWKAYAKKHNLPGADKAVTNDPMEATYV 327
           +  +      G+  A  YFQS+++  N + +A  +A          D  V N   EA+Y 
Sbjct: 239 ISQMGHGVATGHFTAAPYFQSIDSAANRRCLAMLRARF-------GDGCVPNLCWEASYF 291

Query: 328 GIHMWAQAAEKAKSTDVDKVREALAGQTFAAPSGFTLTMDKTNHHLHKPVMIGEIQADGQ 387
            +H++A A  +A S  + ++   + G  F AP G  + +D TNHH      IG + + GQ
Sbjct: 292 QMHIFANAYRQAGSDGIAEILPYILGSEFDAPQGL-VKIDPTNHHTCLYPRIGRVDSHGQ 350

Query: 388 FSVVWQTQEPIRAQPW 403
           F++V Q    +   P+
Sbjct: 351 FTIVRQATRAVYPDPY 366