Pairwise Alignments

Query, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 23/312 (7%)

Query: 8   KAFTLTASIAAMGMTWTAQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGV 67
           K F   A   A+G++   QA   +K+G+   ++G  A         A    D+INA GGV
Sbjct: 8   KGFLALAVATALGVSSYVQA--DVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGV 65

Query: 68  NGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFY 127
           NG+ +  V  D A           +L+ QDKV  V G + S +      V++E   +   
Sbjct: 66  NGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAIT 125

Query: 128 PVQYE---GEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRFFLLGTDYVYPRTTNK 184
           P        E     +F      +QQ I A +Y++    G  K+  +L     Y +    
Sbjct: 126 PGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKG--KKVAVLHDKDTYGQGLAD 183

Query: 185 ILRAFLHAKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVNGDSNVPFYK 244
             +A L  +GV  K +       G  D+  +V  I+  S G        ++ ++  P  +
Sbjct: 184 ATKAQLEKRGV--KPVLYEGLTRGEKDFSAVVTKIR--STGADVVYFGGLHPEAG-PLVR 238

Query: 245 ELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFQSVENP--VNTKFVADWK 302
           +L  QGLK  DV  ++         GI T  LV       Y   V      + + + D K
Sbjct: 239 QLREQGLK--DVKFMSDD-------GIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSK 289

Query: 303 AYAKKHNLPGAD 314
           A  ++    G +
Sbjct: 290 AVVEEFRKAGTE 301