Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 1e-34
 Identities = 93/298 (31%), Positives = 150/298 (50%), Gaps = 13/298 (4%)

Query: 202 GEILGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQLLMQRYM 261
           G  L Q  +G++LGS+  L A+G  + +G++G+IN AHGE+ M+ AY   +   L+  + 
Sbjct: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYF- 61

Query: 262 PQAIEFYPLIALPVAFF---VTAAIGMALERTVIRHLYGRP-LETLLATWGISLMLIQLV 317
              IE +PL+ L    F   VT   G  +ER   + L     L  L++  GISL+L    
Sbjct: 62  --GIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYA 119

Query: 318 RLVFGAQNVEVSNPEWLSGG--VQVLPNLV-LPYNRIVIIAFALCVVVLTWLLLNKTRLG 374
           ++  GA+   +  P  L+G   V +    V L Y ++ I+  A   + L   ++  T+LG
Sbjct: 120 QIAQGAKQQGI--PTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLG 177

Query: 375 LNVRAVTQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALS-QIGNVGPDLGQSYIID 433
              RA  Q+R MA+  G+ T RV    F +G+ +A L GV ++   G      G    I 
Sbjct: 178 RMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIK 237

Query: 434 SFLVVVLGGVGQLAGSVMAAFGLGIANKILEPQIGAVLGKILILALIILFIQKRPQGL 491
           +F   VLGG+G L G+++    LGI+  +    I +    +   +L+++ +  RPQGL
Sbjct: 238 AFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGL 295