Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  140 bits (353), Expect = 7e-38
 Identities = 90/296 (30%), Positives = 157/296 (53%), Gaps = 13/296 (4%)

Query: 210 SGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQLLMQRYMPQAIEFYP 269
           +G+++G I+ + A GL + FGL+ V+N  HG  + LGA+    V  LM  +      +  
Sbjct: 36  AGLAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGSGELWRN 95

Query: 270 LIA----LPVAFFVTAAIGMALERTVIRHLYGRPLETLLATWGISLMLIQLVRLVFGAQN 325
           L+A    + VA  V  A+G+A ER ++R +YG+ L+ +L T G  ++  +L+++++G   
Sbjct: 96  LVAVFPAMLVAMAVAGAVGLAFERFIVRPVYGQHLKQILITMGGMIIGEELIKVIWGPAQ 155

Query: 326 VEVSNPEWLSGGVQVLPNLVLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAVTQNRN 385
           + +  PE L G + V    +  Y  + +    +   VL W  L +T++GL +RA  Q+R 
Sbjct: 156 IPLPLPEALRGSLLVGDAAISKYRLLAVAVGVVVFGVLAW-TLGRTKIGLLIRAGVQDRE 214

Query: 386 MAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQI-GNVGPDLGQSYIIDSFLVVVLGGVG 444
           M    G   GR+ +  F +GS +AGLGGV       N+ P +G    +  F+V+++GG+G
Sbjct: 215 MVESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQMGAQVNVLIFIVIIIGGLG 274

Query: 445 QLAGSVMAAFGLGIANKILEPQIGAVLGKILILALIILFIQK---RPQGLFALKGR 497
              G+++ A  +G    ++   IG +L  +   A I L +     RPQG++ +  R
Sbjct: 275 STGGALIGALLVG----LMTNYIGFLLPTLTQFASIFLMVAVLLWRPQGVYPVANR 326