Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 290 a.a., Benzoate ABC transporter, permease protein 1 from Variovorax sp. SCN45

 Score =  140 bits (353), Expect = 6e-38
 Identities = 86/294 (29%), Positives = 154/294 (52%), Gaps = 16/294 (5%)

Query: 202 GEILGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQLLMQRYM 261
           G  L Q  + +  G +L L A GL + FG++GVIN+AHG   M+GAY  + +  L     
Sbjct: 4   GTFLVQCLNSVQYGLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAFSLAPLFGDQF 63

Query: 262 PQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRP-LETLLATWGISLMLIQLVRLV 320
                   L+ L     + A  G  LE     +LY R  L+ +L T+G+ L+  +L  ++
Sbjct: 64  --------LLMLVAGVVLAAVFGYLLEWAFFSYLYQRDHLQQVLMTYGLILVFEELRSIL 115

Query: 321 FGAQNVEVSNPEWLSGGVQVLPNLVLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAV 380
            G     V  P WL G   +   +  P+ R+   A  + + V  + ++N+TRLG+ +RA 
Sbjct: 116 VGNDVHGVKVPAWLDGSFALGSVMSYPWYRLFASAACIVLAVGLYWVVNRTRLGMMIRAG 175

Query: 381 TQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVL 440
             NR+M    G+   R+  + F  G  +A L G+  + + +V P++G S +I  F++VV+
Sbjct: 176 ASNRDMVRGLGIDVKRLYRIVFAAGVALAALAGMIAAPMSSVYPNMGASVLIICFVLVVI 235

Query: 441 GGVGQLAGSVMAAFGLGIAN---KILEPQIGAVLGKILILALIILFIQKRPQGL 491
           GG+G + G+++A+  +G  +   K+    +  + G  L++A+++++   +P+GL
Sbjct: 236 GGIGSITGALVASLLVGFVDTFGKVFFADLSGI-GIYLLMAIVLIW---KPEGL 285