Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  166 bits (420), Expect = 1e-45
 Identities = 105/295 (35%), Positives = 156/295 (52%), Gaps = 19/295 (6%)

Query: 209 FSGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQLLMQRYMPQAIEFY 268
           F G++ G +L + A+GLA+T GL+  IN+AHG   M G Y T            Q +   
Sbjct: 6   FDGIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLTVFAM--------QKLGLP 57

Query: 269 PLIALPVAFFVTAAIGMALERTVIRHLYGRP-LETLLATWGISLMLIQLVRLVFGAQNVE 327
            L  LP+AF V A  G  LERT+ R +YG+P L+ +L + G++ M +  +    G+    
Sbjct: 58  FLACLPLAFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVAAIDYFVGSSQQN 117

Query: 328 VSNPEWLSGGVQVLPN---LVLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAVTQNR 384
           V  PEWL G  ++      L + + R+ II     + V+  L+L+KTR G  +RA   + 
Sbjct: 118 VQLPEWLRGRTEIGDGAFMLGMGHYRLFIIGVCAVLTVVLQLILSKTRFGSRLRAAVDDP 177

Query: 385 NMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGVG 444
            +AA  G+    V +L F +GSG+AGLGG   ++I  + P     Y+I   +VV +GG  
Sbjct: 178 RVAAGLGINVNIVFLLTFAVGSGLAGLGGALGAEILGLDPTFPLKYMIYFLIVVSVGGTS 237

Query: 445 QLAGSVMAAFGLGIAN---KILEPQIGAVLGKILILALIILFIQKRPQGLFALKG 496
            + G + AA  LGIA+   K   P++GA      +  L+IL +  RPQGLF  KG
Sbjct: 238 SITGPLAAALLLGIADVAGKYFIPKMGA----FTVYLLMILILMWRPQGLFTRKG 288