Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 2e-40
 Identities = 100/292 (34%), Positives = 154/292 (52%), Gaps = 18/292 (6%)

Query: 205 LGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQLLMQRYMPQA 264
           L Q  +G+ LG I  L A+GL I FGLL  +N AHG   +LGAY  Y    +   +    
Sbjct: 6   LFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFW--- 62

Query: 265 IEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPLE-TLLATWGISLMLIQLVRLVFGA 323
                 +AL +A  V AA+  A+ER +I+ +Y  P    +L T GI+L++ +   L++G 
Sbjct: 63  ------LALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGP 116

Query: 324 QNVEVSNPEWLSGGVQVLPNLVLPYNRIVIIAFALCVVVLTWLLLNKTRLGLNVRAVTQN 383
               ++ P  L G V +L + + PY R+ +I FA  + +  WLLL +TR G  VRA +++
Sbjct: 117 VGKNIAVPPELRG-VLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSES 175

Query: 384 RNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGV 443
               +  G    R+  L F LG G+AG+ GV  + +    P +G   +  +F+VVV+GG+
Sbjct: 176 TETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGM 235

Query: 444 GQLAGSVMAAFGLGIANKI---LEPQIGAVLGKILILALIILFIQKRPQGLF 492
           G   G+++    +G+   +   L PQ GA L     +A +IL    RP GLF
Sbjct: 236 GSFGGALVGGLLVGVVQSMMTSLWPQ-GASLMIYGAMAAVILV---RPYGLF 283