Pairwise Alignments

Query, 255 a.a., XRE family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 269 a.a., transcriptional repressor of the aga regulon from Escherichia coli BL21

 Score =  157 bits (398), Expect = 2e-43
 Identities = 96/252 (38%), Positives = 146/252 (57%), Gaps = 8/252 (3%)

Query: 6   TPQRRHNILTLLNEQGEVSVDELAKRFETSEVTIRKDLAALESNGLLLRRYGGAI----T 61
           T +RR  I+  L +QG V V++L+  +  S VTIR DLA LE  G+ +R YGGA+    T
Sbjct: 15  TSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGALICDST 74

Query: 62  MP--QELVGDATQPISVYKRAIARAAVMRLREHARIIIDSGSTTAAMIPELGHQPGLVVM 119
            P  +  V D +   +  KR++A+AAV  ++   R+I+DSG+TT  +   +     ++ M
Sbjct: 75  TPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFEIARLMRKHTDVIAM 134

Query: 120 TNSLHVARALSELEHEPVLLMTGGTWDPHSDSFQGQVAEQVLRSYDFDQLFIGADGIDLQ 179
           TN ++VA AL E E    LLMTGG     S SF G  AEQ L++Y FD LF+G D IDL+
Sbjct: 135 TNGMNVANALLEAEGVE-LLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLE 193

Query: 180 RGTTTFNE-LLGLSRVMAEVAREVVVMVESDKIGRKIPNLELPWSSVHTLITDDRLPLEA 238
           RG +T NE    L+R M EVA  ++V+ +S K  R   +  +    +  +I D+ +P ++
Sbjct: 194 RGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADS 253

Query: 239 RDQIQARGITLI 250
            + ++  G+ +I
Sbjct: 254 LEGLRKAGVEVI 265