Pairwise Alignments

Query, 765 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 817 a.a., penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 1e-26
 Identities = 71/214 (33%), Positives = 114/214 (53%), Gaps = 14/214 (6%)

Query: 13  LAAAVMLAGLRLWPHVPLEQAVTSSRV-----VLADDGSLLRMTLADDGQYRLW-LPLER 66
           L   V  A L L P +P  +++ S ++     V + DG L+    A+ G+ R   +    
Sbjct: 19  LVLGVSGAFLYLSPSLPSVESLRSIQLQIPLRVYSSDGKLI----AEFGEMRRSPIRFAE 74

Query: 67  ISPSLVEALLLKEDRNFYWHPGINPPALVRAAMATYSGGQRQ-GGSTLSMQLARRLWDLN 125
           I P  ++ALL  ED NF  H G++P +L+RAA      G  Q GGST++MQ+A+  +  +
Sbjct: 75  IPPQFIQALLSAEDDNFLNHYGVDPSSLMRAATQLVKTGHIQTGGSTITMQVAKNFFLTS 134

Query: 126 TRQVPGKLQQMALALWLEARYSKHDILEAYLNLAPMGGNIEGAEAASRIYFGKSAAQLSL 185
            R    K  ++ LAL +E   +K +ILE Y+N   +G    G +AA+++Y+GKS   +SL
Sbjct: 135 ERSFSRKTNEILLALQIERELTKDEILELYVNKIYLGNRAYGIDAAAQVYYGKSIRDVSL 194

Query: 186 SEALALAVIPQQPGRRARFGPSLQHARQRLMADW 219
           ++   +A +P+ P   +RF P     R +   DW
Sbjct: 195 AQMAMIAGLPKAP---SRFNPLANPVRAKERRDW 225



 Score = 87.8 bits (216), Expect = 2e-21
 Identities = 102/405 (25%), Positives = 158/405 (39%), Gaps = 83/405 (20%)

Query: 277 LERLISGFIAERRSTGVENATAILIDSRDQSVKALVGSADYLSTRLHGQVNGVLSRRSPG 336
           L+RL  G + +     V  +  + +D  + +++ALVG   +  +  +     V ++R PG
Sbjct: 406 LQRLDDGTL-KFSQVPVAQSALVTLDPNNGAIRALVGGFSFEQSNYN---RAVQAKRQPG 461

Query: 337 STLKPFLYGLALDQGVIHPMSILKDLPSNF------GYFQPENFDGSFVGPLTARDALIR 390
           S+ KPF+Y  ALD G     S++ D P  F        ++P+N   +F+GP+  R+AL +
Sbjct: 462 SSFKPFIYSAALDSGYT-ASSLVNDAPIVFVDESVDKVWRPKNDTNTFLGPIRMREALYK 520

Query: 391 SRNIPAVWLASQVKSPSLYGLLQRAGIKGLRDESHYGLALALGGGEMTPEELARLYVMLA 450
           SRN+ ++ L   +        + + G    + +    L+LALG   +TP E+A  +   A
Sbjct: 521 SRNLVSIRLLQAMGVDRTIDYIAKFGFN--KQDLPRNLSLALGTATLTPMEIATGWSTFA 578

Query: 451 GDGH--------------------LRPLRYLQ-----------EQPQSTGAQLLTPQAAF 479
             G+                      P R  Q           EQP ST A      +AF
Sbjct: 579 NGGYKITPYLIERIESRSGETLFTANPARVPQGAQDQAGLAAPEQPISTAAMPGEAPSAF 638

Query: 480 ---------------------------MVRDMLRRNPRPDGLPGRHWRTAWKTGTSWGFH 512
                                      M++D+++R      L       A KTGT+    
Sbjct: 639 SQVAAASQAPAVAEQIIDGRTTYILTSMLQDVIKRGTGRRALALGRTDLAGKTGTTNESK 698

Query: 513 DAWSAGLVGPYVLVVWVGNFD-----GRPNPAFIGAKTAAPLFFRIADALPLALPNVVIK 567
           DAW +G    YV  VWVG FD     GR      G   A P++     A   AL +    
Sbjct: 699 DAWFSGYNADYVTTVWVG-FDQPETLGRRE---YGGTAALPIWMNFMGA---ALKDKPAH 751

Query: 568 ADKPPAGLVRIDVCAASGELPNRWCPQTRKTWYIPGVSPIRVSNL 612
           A   P G++ + V   SG   +   P      +    SP  V  L
Sbjct: 752 APAEPEGILSLRVDPVSGRAASPSTPNAYFELFKAEDSPPSVDEL 796