Pairwise Alignments

Query, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  133 bits (335), Expect = 6e-36
 Identities = 101/340 (29%), Positives = 154/340 (45%), Gaps = 51/340 (15%)

Query: 20  ALGALILIVLLALPLLSLLPPDNAFHISAYTLTLVGKILCYAIVALALDLVWGYAGMLSL 79
           AL +L++  L+ALPLL  LP          + TL  +IL +A+ ALA +L+ GY G+LS 
Sbjct: 16  ALLSLVVASLVALPLL--LP----------SATLATEILIFAMAALACNLLLGYTGLLSF 63

Query: 80  GHGLFFALGGYAMGMYLMRQASGDELPAFMTFLSWTELPWYWVGTQHFVWAMCLVVLAPG 139
           G G+FF +G Y   + ++                            H  W M   +L   
Sbjct: 64  GQGIFFGVGAYGAALLMI----------------------------HLQWGMFAALLGAA 95

Query: 140 L----LALVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTNFR---- 191
           +    LAL+ G  A R    G+YF ++T A +     L +      GG+NG  +      
Sbjct: 96  VFGAFLALLVGALAIRRT--GIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNI 153

Query: 192 SILGFGITEPGTRAVLFVATVALLVASLFIGWRLARSKFGRVLTALRDAENRLMFCGYDP 251
            I G  + +       +V    L +       R+ RS FG  L A+R+ E R    GYD 
Sbjct: 154 EIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDT 213

Query: 252 RGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLG 311
           R FK+ V++LS  + G+AGALY   +     S +    S    +   +GG G+L G LLG
Sbjct: 214 RHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLG 273

Query: 312 AGVVNGMKSWFTVAFPEYWLFFLGALFIIVTLYLPKGVIG 351
           AG +  +    +  +P  WL  LG + I+V +++  G+ G
Sbjct: 274 AGAIVLLGDVLSELWPR-WLMLLGVILILVVVFMRGGLWG 312