Pairwise Alignments

Query, 400 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 418 a.a., N-acetylmuramoyl-L-alanine amidase from Serratia liquefaciens MT49

 Score =  257 bits (656), Expect = 5e-73
 Identities = 154/403 (38%), Positives = 225/403 (55%), Gaps = 31/403 (7%)

Query: 3   RRQLLNLLLASPLFTLPFA--AHATQISNARLWRSDEKLRLVFDLSGPVQYKTFTLSAPE 60
           RR+LL  + AS L ++     A ++ +   R+W S    R+  + +  ++YK F L+ P+
Sbjct: 10  RRRLLQGVAASWLLSVSRVGVAASSHVIAVRVWPSSTYTRVTLESNVELKYKQFALTNPD 69

Query: 61  RLIIDLSGAGLS----GDFSQLALKNSGITSIRSGHFGKGDTRIVLDLAAPMQLNSFLLP 116
           R+++D+ G  L+    G   Q+   +  +   R G F +   R+VL+L   +  + F L 
Sbjct: 70  RVVVDIEGVQLNSVLKGIVGQVRDDDPYLKQARVGQFDQNTVRLVLELKRSVTPHMFTLA 129

Query: 117 PQDGQGHRLVLDLTSAT--------------------QAPRQIAAEPKPLVDKAHPKRDI 156
           P     +RLV+DL  +                        R + AE  P   KA   R I
Sbjct: 130 PVPEYRNRLVMDLYPSKGGSGEDYDPLLALLEDYNKGDLERTLPAEA-PQAGKAGRDRPI 188

Query: 157 IVVVDPGHGGKDPGAVGSKGQREKDVVLSIAQLLAKRLKREKGFDVKLVRNDDFFVPLRK 216
           ++++DPGHGG+DPGA+G    REKD+VL IA+ L+  +KRE    V + RN+D F+PL+ 
Sbjct: 189 VIMLDPGHGGEDPGAIGKFKTREKDIVLQIARRLSTLIKREPNMKVFMTRNEDVFIPLKV 248

Query: 217 RVEIAHKHNADMFISVHADAAPRVTASGASVYALSEGGATSATARFMAQRENGADLLGAT 276
           RV  A K  AD+F+S+HADA     A G+SV+ALS  GATS+ A+F+AQ +N +DL+G  
Sbjct: 249 RVAKARKQRADLFVSIHADAFTNRAARGSSVFALSTKGATSSAAKFLAQTQNESDLIGGV 308

Query: 277 RLLNLKDKDPMLAGVILDMSMNATIASSLQLGNSILGSLEGITSLHQRRVEQAGFAVLKS 336
                K  D  L   + D+   ATI  SL+ G  +L  +  I  LH+ RV+QAGFAVLK+
Sbjct: 309 S----KSGDRYLDHTMFDLLQTATINDSLKFGKEVLNRMGKINRLHKNRVDQAGFAVLKA 364

Query: 337 PDVPSILVETGFISNARDSARLVTARHQQAVADGLFEGLKKYF 379
           PD+PSILVET FISN  +  +L T   QQ VA+ +  G+K YF
Sbjct: 365 PDIPSILVETAFISNIEEERKLRTTHFQQQVAESILAGIKAYF 407