Pairwise Alignments

Query, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  480 bits (1235), Expect = e-139
 Identities = 250/567 (44%), Positives = 360/567 (63%), Gaps = 4/567 (0%)

Query: 381  RVTRMLGTRRDITAGKALEEQQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGFET 440
            R   +LG  RDI+  +  E+  R+A+TVFE ++  I+I DP   ++  N+AFSRV+G+  
Sbjct: 694  RFEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAV 753

Query: 441  DDMIGRNVVELPSSRDARRHFPVIRQALLSHGTWQGELVETRKNGELYPQWLQLNVVRDV 500
             +++ +    L        H   + + L   G+W+GE+   R++G+ YP W+ +  V D 
Sbjct: 754  SEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDD 813

Query: 501  RGKVSHIVGFFADLSARRESEERMRYLTHYDELTGLANRSLFRERLREAHQRVRQGGRNL 560
             G ++  V FF D+S R+ SE+R+  L +YD LT L NR+LF++RL  A Q+  +    +
Sbjct: 814  EGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWV 873

Query: 561  ALLHINLDRFKLLNDSLGHEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGN 620
             L+ ++LDRFK +NDSLGH   D++L+ MA RL+  + + DT+AR+ GDEF +L      
Sbjct: 874  VLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPT 933

Query: 621  ----LSSLARVATRLLAKLRVPVTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQ 676
                L+    VA  +L  L  P  +E  E  V+AS+G++L P +  E+S L+  ++ AM 
Sbjct: 934  REMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMY 993

Query: 677  HAKHLGGNNFQFYTDSLQASTLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEA 736
            HAK  G NNFQFY   + AS LERL+LE+ LR A+E+ +  ++YQP+      +L  AEA
Sbjct: 994  HAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEA 1053

Query: 737  LIRWEHPQWGMVPPGDFIGLAEETGLIVPLGEFVLREACWQACEWQRQGLAPIRVSVNLS 796
            L+RW HP  G+VPPGDFI + EE GL+V +G++VLREA  Q   W +  +   +VSVN+S
Sbjct: 1054 LLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNIS 1113

Query: 797  VHQLRQGKLVSLVRQVLEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAID 856
              Q   G+L + +  +LEE+GL P  LELELTES L+  V   +     L++LG+ +A+D
Sbjct: 1114 ARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVD 1173

Query: 857  DFGTGYSSLSYLKRIPVDYVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVE 916
            DFGTGYSSL+YLK+ P+D +KID+TF+ GL +G +DA I RAIIAMAH L L V+AEGVE
Sbjct: 1174 DFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVE 1233

Query: 917  DQQQLDFLRGERCDEVQGYLISRPMEA 943
              +QL+FLR   CDEVQGYL  RPM A
Sbjct: 1234 THEQLEFLREHGCDEVQGYLFGRPMPA 1260



 Score = 50.8 bits (120), Expect = 6e-10
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 21/218 (9%)

Query: 328 LHPDDLPLLKRALVEHLKGRSEDYQV--EYRVRHGDGHWVWIEDRGRAVERAPSGRVTRM 385
           LHP+D    + AL    +    D  +  + R RH DG W   + R + + R   G VTR+
Sbjct: 500 LHPEDAAHYQ-ALRRQQRDNCHDQPLHCQLRFRHRDGSWRCYDIREQVLTRNAEGLVTRI 558

Query: 386 LGTRRDIT----AGKALEEQQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGFETD 441
           +G  +D+T    A ++L + ++    + E+ S+ I   D   KL  V+ +   V G++ D
Sbjct: 559 IGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDNQLKLNYVSPSVQSVLGYQAD 618

Query: 442 DMIG---RNVVELPSSRDARRHF----------PVIRQALLSHGTWQGELVE-TRKNGEL 487
            +     +++V  P+                  P     L S    Q  L +  R +G  
Sbjct: 619 WIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRK 678

Query: 488 YPQWLQLNVVRDVRGKVSHIVGFFADLSARRESEERMR 525
            P  L+L +V D   +   ++G   D+S +R +E+ +R
Sbjct: 679 IPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLR 716