Pairwise Alignments

Query, 273 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 20/234 (8%)

Query: 42  SYPPFSFLNEQNQLDGFDVDVAKAVAQKLGVKLRLETPSWDVIAAGRWSGRYDICICSMT 101
           +YPPF++++  N+L GFDVD+  A+ +++ V+  L    W+ I     + +YD  + SM 
Sbjct: 31  AYPPFNYVDADNKLHGFDVDITHALCEQMKVECTLVAQDWEGIIPALMARKYDAIVASMI 90

Query: 102 PSKARAEVFDFPVEYYASPAVIVVNAKDDRIHSAK-DLSGKKVGLTSASSYESYLNKNLV 160
            ++ R +   F   YY +P  + V AKD +I SA+ D  G  VG  S+S+   Y      
Sbjct: 91  DTEERRKKIAFTDHYYRTPLTVAV-AKDSKIDSAQTDFVGYTVGAQSSSTQAIY------ 143

Query: 161 IEGAEDTQLQYPFEDVQIAPYDTDNVAFQDLGLGAGVRLDAILTNLVTAQPRLTQD--KR 218
              AED    Y      +  Y T + A  DL  G   RLD ++ +       + ++    
Sbjct: 144 ---AEDV---YGKAGADVKLYPTMDEANADLAAG---RLDGVIADKFPLHEWMNKNGGDC 194

Query: 219 FKLAGEPLYSEPN-SVAIEKGDPQWDSKVREVFAQLKQDGTLSKLSQKWIGADI 271
            K+ G+   ++ + ++A+ K D     ++     Q+  +GT  K++ K+   DI
Sbjct: 195 CKILGDVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKYFAFDI 248