Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  603 bits (1555), Expect = e-177
 Identities = 295/356 (82%), Positives = 326/356 (91%), Gaps = 3/356 (0%)

Query: 9   LCAAVISGMAHA--EEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALEAKL 66
           + A + +G  HA  E++TLRVYNWFDYITP+ L  F+ ++  +KLVYDIFDTNEALEAKL
Sbjct: 12  IAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQ-KDSGVKLVYDIFDTNEALEAKL 70

Query: 67  LTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKFAVP 126
           LTGN+GYDVVVPSNVFLAKQIEAGVFQPLDRS+L NW+HLDP LMKLIEANDPGNKFAVP
Sbjct: 71  LTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVP 130

Query: 127 YMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQ 186
           YMYGT+LIGFNP KVKAALG NAPVDSWDLIFKEENI+KLKQCGVALLDSPSEILPLALQ
Sbjct: 131 YMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEILPLALQ 190

Query: 187 HLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQAAN 246
           +LGL PNS  P DY KAE L+LKIRP++TYFHSSKYMADIANGDICVAVGYSGSFSQAAN
Sbjct: 191 YLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGSFSQAAN 250

Query: 247 RARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISDFVG 306
           RAR+A NGV VDMRLPKEGAPIWFDMLAIPKGA NP+DA+TFINYLL+P+VIAPISDFVG
Sbjct: 251 RAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVG 310

Query: 307 YPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362
           YPNPNKDAT++V+P+IRNNPNLYPT  AMA LYTLKPL R+AERARTRAW++IKSG
Sbjct: 311 YPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIKSG 366