Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  397 bits (1021), Expect = e-115
 Identities = 195/358 (54%), Positives = 256/358 (71%), Gaps = 2/358 (0%)

Query: 5   KSLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALEA 64
           K+L+  A +    +     T+  YNW DYI P  L DF+     IK V D+FD+NE LE 
Sbjct: 8   KALMAGAGLTLACSVQAAPTVHFYNWSDYIGPTTLADFEKATG-IKPVQDVFDSNETLEG 66

Query: 65  KLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKFA 124
           KLL GN GYDVVVPSN FL KQI+AG FQ LD++ L N+ +LDP LMK +E NDPGN++A
Sbjct: 67  KLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDPGNQYA 126

Query: 125 VPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLA 184
           VPY++GT  IG+N DKVKAALGV+  +DSW ++F+ EN+ KL +CGVA LDS  E+LP  
Sbjct: 127 VPYLWGTNGIGYNVDKVKAALGVDT-IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAV 185

Query: 185 LQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQA 244
           L ++GL+PNS++PKDYAKAE  LL +RPYVTYFHSSKY+ D+ANGDICVA G+SG   QA
Sbjct: 186 LNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQA 245

Query: 245 ANRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISDF 304
             RA +AK GV +   +PKEG  +WFD+LAIPK AKN ++A+ FINYLL+P+VIA +SD+
Sbjct: 246 KARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSDY 305

Query: 305 VGYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362
           VGY NPN  A   +D ++R +  +YP +  +  ++    L    +R  TR+W+K+KSG
Sbjct: 306 VGYANPNPKAGALMDQAVRTDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSG 363