Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  378 bits (970), Expect = e-109
 Identities = 172/359 (47%), Positives = 257/359 (71%), Gaps = 1/359 (0%)

Query: 4   LKSLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALE 63
           L SL     V +    A++ ++ +YNW+DYI P  ++DF+ +   + +VYD+FD +E ++
Sbjct: 11  LVSLFSFGVVCAEAGDAQKPSVHIYNWYDYIAPNTVKDFQKE-AGVSVVYDVFDNSEVMQ 69

Query: 64  AKLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKF 123
           +KL+ G +GYDVVV S   L   I+AGV + LDRS+L NW HLDP ++  +++NDPGN +
Sbjct: 70  SKLMAGRSGYDVVVASADLLPNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSNDPGNSY 129

Query: 124 AVPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPL 183
           A PY++GT  IG++ DKVK+ LG +APV+SWDLIFKEEN++KL+QCGVA+LD+P E++P+
Sbjct: 130 AAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEVIPI 189

Query: 184 ALQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQ 243
           AL +LGL  NS NP DY KA+ LLLK+RP++ YF SS++++D+ANG++CV +G++G  S 
Sbjct: 190 ALHYLGLPYNSHNPDDYKKAQELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWAGGVSD 249

Query: 244 AANRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISD 303
           A   +  A N   +   +P+EGAP+W + +     A NP+    FINY+L+P+VIA  S+
Sbjct: 250 AQKASELAGNHRNLVYSIPREGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVIAESSN 309

Query: 304 FVGYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362
           ++ YPN NKDAT  V+  IR+NP +YP++  ++TL+ L+PL    ER RTRAW+ +K+G
Sbjct: 310 YLSYPNANKDATALVEKKIRDNPGVYPSKDVLSTLFPLEPLPLKLERIRTRAWNTVKTG 368