Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  420 bits (1080), Expect = e-122
 Identities = 203/338 (60%), Positives = 252/338 (74%), Gaps = 2/338 (0%)

Query: 24  TLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALEAKLLTGNAGYDVVVPSNVFL 83
           T+ VYNW DYI    L DF+A +  IK+VYD+FD+NE LE KLL G  GYDVVVPSN FL
Sbjct: 25  TVSVYNWTDYIGDTTLADFQASSG-IKVVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFL 83

Query: 84  AKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKFAVPYMYGTILIGFNPDKVKA 143
           A+Q +AG F PLDRS+L NW+HLDPKL+K +E NDPGN++AVPY++GT  IG+N DKVKA
Sbjct: 84  ARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYLWGTNGIGYNVDKVKA 143

Query: 144 ALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLDPNSSNPKDYAKA 203
           ALGV+  +DSW ++F+ EN+ KLKQCGVA +DSP E+ P  L +LG+DP S  P DYAKA
Sbjct: 144 ALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLGMDPRSEKPGDYAKA 202

Query: 204 EALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQAANRARDAKNGVTVDMRLPK 263
           EA LL++RPY+TYFHSSKY++D+ANGD+C+A GYSG   QAANRA +AKNGV V   +PK
Sbjct: 203 EARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPK 262

Query: 264 EGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISDFVGYPNPNKDATEQVDPSIR 323
           EG+ +WFD+LAIPK A NP+ A  FINYLL P+VIA +S  VGY N N DA   +D S+ 
Sbjct: 263 EGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYANANPDAKAYMDASLV 322

Query: 324 NNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKS 361
           NNP +YP +  +  LY          R  TR+WSKIKS
Sbjct: 323 NNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKS 360