Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  289 bits (740), Expect = 7e-83
 Identities = 147/359 (40%), Positives = 228/359 (63%), Gaps = 2/359 (0%)

Query: 3   MLKSLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEAL 62
           M +SL L + V++    AEEK + +Y+W DY+ P+ L+ F+ Q    K+ YD FDT E L
Sbjct: 4   MRRSLCLLSLVLALPLQAEEKVVNLYSWADYVAPQTLQRFE-QETGYKVRYDTFDTPEVL 62

Query: 63  EAKLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNK 122
           E KLLTG +GYDVVVPS+  LA+ ++A   QPLD   +  + +LD  L+  +   DPGN+
Sbjct: 63  ETKLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNR 122

Query: 123 FAVPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILP 182
            AVPY +GT+ +G N + V+  LG + P+DS DL+FK E  ++LK CG+AL DSP E++ 
Sbjct: 123 HAVPYTWGTLGLGVNVEAVRQRLG-DVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIG 181

Query: 183 LALQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFS 242
           +AL +LG DP S N  D A A+ LL +++P ++Y  + + + D+ANG +C+A+ Y+G  +
Sbjct: 182 VALNYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAA 241

Query: 243 QAANRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPIS 302
            AA++AR A     V  R+P+EG  +W D L IPK A +P+ A  FI ++L+P+ +A ++
Sbjct: 242 MAADQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALT 301

Query: 303 DFVGYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKS 361
           + + + N N+ AT  VD ++RN+P++YP+      LY  + +     R R R W+  +S
Sbjct: 302 NTLFFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360