Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  391 bits (1005), Expect = e-113
 Identities = 183/359 (50%), Positives = 259/359 (72%), Gaps = 1/359 (0%)

Query: 4   LKSLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALE 63
           +++ +L   +++    +  +T+++YNW  Y+ P  L++F+ Q   I   YD++D+NE L+
Sbjct: 1   MRTFLLAPLMLAASVASAAETVKIYNWSSYVAPDTLKNFQ-QASGIVPTYDVYDSNETLD 59

Query: 64  AKLLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKF 123
            KL+TGN+GYDVV PSN F+A+QI+    + LD+S+L NW +L+P L+K +E NDPGN++
Sbjct: 60  GKLMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQY 119

Query: 124 AVPYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPL 183
             PY++G+  IG+N DKVKA LG NAPVDSWDLIFK E +SKLK CGVA+LD+  E+LP+
Sbjct: 120 GFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPI 179

Query: 184 ALQHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQ 243
           AL +LGL  +S +PKDY KA+ LL+K+RPY++YFHSSKY  D+ANGDICV VG+SG   Q
Sbjct: 180 ALHYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQ 239

Query: 244 AANRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISD 303
           A NRA +A NGV V   +PKEGAP+WFDM+A+P  A + +  Y ++NYLLQP+V+A IS+
Sbjct: 240 AKNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISN 299

Query: 304 FVGYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362
            V Y N N  A   VDP+++ N  +YP++  M  LY L+ +    +R RTR W+ IK+G
Sbjct: 300 HVQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKAG 358