Pairwise Alignments

Query, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Escherichia coli ECRC62

 Score =  404 bits (1037), Expect = e-117
 Identities = 196/352 (55%), Positives = 254/352 (72%), Gaps = 2/352 (0%)

Query: 12  AVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALEAKLLTGNA 71
           AV  G   AE+KTL +YNW DYI P  + +F+ +   IK+VYD+FD+NE LE KL+ G+ 
Sbjct: 19  AVSVGTLAAEQKTLHIYNWSDYIAPDTVANFEKETG-IKVVYDVFDSNEVLEGKLMAGST 77

Query: 72  GYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKFAVPYMYGT 131
           G+D+VVPS  FL +Q+ AGVFQPLD+S+L  WK+LDP+L+KL+  +DP NKFA+PYM+ T
Sbjct: 78  GFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWAT 137

Query: 132 ILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLD 191
             IG+N DKVKA LG NAPVDSW+LI K EN+ KLK CGV+ LD+P E+    L +LG D
Sbjct: 138 TGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKD 197

Query: 192 PNSSNPKDY-AKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQAANRARD 250
           PNS+   DY   A  LLLK+RP + YFHSS+Y+ D+ANGDICVA+G++G   QA+NRA++
Sbjct: 198 PNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKE 257

Query: 251 AKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISDFVGYPNP 310
           AKNGV V   +PKEGA  +FD+ A+P  AKN  +AY F+NYLL+P V+A ISD V Y N 
Sbjct: 258 AKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANA 317

Query: 311 NKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362
           NK AT  V   +R+NP +YP     A L+TLK      +R RTRAW+K+KSG
Sbjct: 318 NKAATPLVSAEVRDNPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSG 369