Pairwise Alignments

Query, 330 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  123 bits (309), Expect = 6e-33
 Identities = 108/331 (32%), Positives = 160/331 (48%), Gaps = 12/331 (3%)

Query: 6   LTTLNAVSLVINAFKAEGL-PAETLLAGSGICAADLSRADACITTNQEMRVCTNAVALRR 64
           +T +  V  ++  ++  G+ PAE L A   I   +L+R  A +T  Q   +  +A+    
Sbjct: 13  VTPMAFVRAIVQGYERYGVDPAEALKAAQ-ITPRELARPGARVTAAQFEALSEHAMQELD 71

Query: 65  DIGLE-LGRKMHVSSYGMLGYALLTCATFGDALRLALRYPALLGTLFELSLENDGERIWL 123
           D  L    R++   SYGML  A LT    G A++   R+  LL     L+LE  G    L
Sbjct: 72  DEALGWFSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATL 131

Query: 124 TAADYRETPALEMFNVEFCLV-SLKIICDDL---LGQPLPLLGARFEYSAPDYHARYHEC 179
              + R  P  + F  EFCLV SL+ +   +   +   + L  A F ++AP +   Y   
Sbjct: 132 RITENR--PLDDAFR-EFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPM 188

Query: 180 FACSLHFEASANAFAFDKRWLDQPLPLADAVTHQAMTDRCRKQNLEFTGRQAWLG-RIRH 238
           F   + F+A     +FD+R+L  PL   D    + M  R     +    R   LG R+R 
Sbjct: 189 FTPEVRFDAPQAGISFDERYLALPLQ-RDERALRTMLKRALPLTILQYRRDRLLGQRVRE 247

Query: 239 LLAAQLHAAPGIEGLAAQMNCSARTLRRHLHDLGSSYQELLDELRFERAKQLLGQDELPI 298
           LL ++   A   E LA  +N S RTL R LH+ G+S Q L +E+R E A +LL +   PI
Sbjct: 248 LLRSRASEATTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPI 307

Query: 299 YRIAEQLGFSETASFRHAFVRWSGVAPSQFR 329
            ++A  +GF    SF  AF++W+G AP  FR
Sbjct: 308 KQVALAVGFRNEKSFSRAFLQWTGHAPRDFR 338