Pairwise Alignments

Query, 330 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 3e-27
 Identities = 90/304 (29%), Positives = 139/304 (45%), Gaps = 14/304 (4%)

Query: 34  GICAADLSRADACITTNQEMRVCTNAVALRRD--IGLELGRKMHVSSYGMLGYALLTCAT 91
           G+  A L   DA    +   R+   AV L  +  IGL + R +  +S+ ++GYAL++  T
Sbjct: 6   GLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMSSRT 65

Query: 92  FGDALRLALRYPALLGTLFELS--LENDGERIWLTAADYRETPALEMFNVEFCLVSLKII 149
             +     +RY  ++    +LS  L  +G  + LT       P     + E  L     +
Sbjct: 66  LAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHLPPTRH--SAEASLACALAL 123

Query: 150 CDDLLGQPLPLLGARFEYSAPDYHARYHECFACSLHFEASANAFAFDKRWLDQPLPLAD- 208
           C  L G+P+       +   P     Y   F   L F A  +A  F++  ++ PLP A+ 
Sbjct: 124 CKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTANE 183

Query: 209 --AVTHQAMTDRCRKQNLEFTGRQAWLGRIRHLLAAQL-HAAPGIEGLAAQMNCSARTLR 265
             AV H    DR   + L          R+R +L   L    P  E LA  ++ S RTL+
Sbjct: 184 AMAVLH----DRFAGEYLARFSESRVSHRVRQVLCRILPQGEPKRETLAQALHLSQRTLQ 239

Query: 266 RHLHDLGSSYQELLDELRFERAKQLLGQDELPIYRIAEQLGFSETASFRHAFVRWSGVAP 325
           R L + G+S+Q LLD+ R E A+Q L Q  + +   A  LGF++ ++F  AF RW    P
Sbjct: 240 RRLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATP 299

Query: 326 SQFR 329
           S++R
Sbjct: 300 SEYR 303