Pairwise Alignments

Query, 330 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 2e-30
 Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 6/318 (1%)

Query: 18  AFKAEGLPAETLLAGSGICAADLSRADACITTNQEMRVCTNAVALRRD--IGLELGRKMH 75
           A +  G   E LL   G+ A  LS A A ++  + M +   A+ +  +  +GL +GR   
Sbjct: 22  ALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSGEAALGLRMGRLSR 81

Query: 76  VSSYGMLGYALLTCATFGDALRLALRYPALLGTLFE--LSLENDGERIWLTAADYRETPA 133
           ++  G+ G       T G+A R  LR+  L    +      E D +  WL          
Sbjct: 82  LAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQGAWLRFYSISPYND 141

Query: 134 LEMFNVEFCLVSLKIICDDLLGQPLPLLGARFEYSAPDYHARYHECFACSLHFEASANAF 193
              F V+  L        +L G P+       E++AP Y ARY    +  + F A  N  
Sbjct: 142 YNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQPLCSTPVQFAADGNQL 201

Query: 194 AFDKRWLDQPLPLADAVTHQAMTDRCRKQNLEFTGRQAWLGRIRHLLAAQLHAA--PGIE 251
              +  L    P     T Q +   C  + L+ T  ++   RI HLL   L+    P +E
Sbjct: 202 RLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERITHLLGPLLNGGREPDLE 261

Query: 252 GLAAQMNCSARTLRRHLHDLGSSYQELLDELRFERAKQLLGQDELPIYRIAEQLGFSETA 311
            +A  +   + TLRR L + G+ +++LL+E R + A+  +    L    IA  LGF+   
Sbjct: 262 EVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIRDTALAFGEIAYLLGFASAE 321

Query: 312 SFRHAFVRWSGVAPSQFR 329
           +F+ AF RW+G+ P +FR
Sbjct: 322 AFQRAFKRWTGLTPGEFR 339