Pairwise Alignments

Query, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

Subject, 476 a.a., Uncharacterized transporter YaaJ from Escherichia coli ECRC62

 Score =  372 bits (954), Expect = e-107
 Identities = 195/464 (42%), Positives = 283/464 (60%), Gaps = 9/464 (1%)

Query: 5   INDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQALMLS 64
           IN  L G V+I L+ G G +FT R+ FVQ R+        K+S+    G L+SFQ+L  S
Sbjct: 8   INSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTSFQSLCTS 67

Query: 65  LAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEGTYRG 124
           LA RVG+GN+AGV +A+T GGPGAVFWMWV A +GM++SF ECSL QLYK  D  G +RG
Sbjct: 68  LAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERDVNGQFRG 127

Query: 125 GPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFGLDTTYTGLALAV 184
           GPA+Y+  GL  RW+G++ A  LL+ +G  F+G+QA+AV  +L+ +F      TG+ LAV
Sbjct: 128 GPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPLVTGIILAV 187

Query: 185 LLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATIVKSAFGLDQA 244
              L    G+  +A +    VP+  ++++  ++ + V+    +P ++ +I +SAFG  +A
Sbjct: 188 FALLAITRGLHGVARLMQGFVPLMAIIWVLTSMVICVINIGQLPHVIWSIFESAFGWQEA 247

Query: 245 FGGLVG----SAIIMGVKRGVFANEAGLGSAPNVAAVAS--VEHPIAQGVVQAFSVFLDT 298
            GG  G     AI  G +R +F+NEAG+GSAPN AA A+    HP AQG+VQ   +F+DT
Sbjct: 248 AGGAAGYTLSQAITNGFQRSMFSNEAGMGSAPNAAAAAASWPPHPAAQGIVQMIGIFIDT 307

Query: 299 FVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGDWGRMFISVALALFVFTSIMYN 358
            VICT +A+LILL+G  T     +GI L Q ++  ++G WG  F+++ + LF F+SI+ N
Sbjct: 308 LVICTASAMLILLAGNDTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFAFSSIVAN 367

Query: 359 YYLGESNLRFLVGNNRKVLMGYRALVLVLIFWGSIENLSTVFAFADITMTMLAFVNLFAL 418
           Y   E+NL FL  NN K +   R      +  G++ +L  ++  ADI M  +A  NL A+
Sbjct: 368 YIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMAITNLTAI 427

Query: 419 AFLFKIAMRILNDYDNQRAAGIKTPVFDSSQFPDL--DLDRKAW 460
             L  +   I +DY  QR  G++ PVFD  ++PD+   L   AW
Sbjct: 428 LLLSPVVHTIASDYLRQRKLGVR-PVFDPLRYPDIGRQLSPDAW 470